{"doi":"10.48539/hbm652.vrpb.452","title":"Anatomical Structures, Cell Types and Biomarkers (ASCT+B) Tables to 3D Reference Object Library Crosswalk, v1.9","abstract":"This lookup table associates anatomical structure terms used in the 3D Reference Object Library<br>(https://humanatlas.io/3d-reference-library) to Anatomical Structures, Cell Types and Biomarkers (ASCT+B) Table<br>(https://humanatlas.io/asctb-tables) (Börner et al. 2021) via ontology IDs from Uberon (Mungall et al. 2012) and<br>Foundational Model of Anatomy (Golbreich, Grosjean, and Darmoni 2013; Rosse and Mejino 2003).<br><br>**Bibliography:**<br><br>* Börner, Katy, Sarah A. Teichmann, Ellen M. Quardokus, James C. Gee, Kristen Browne, David Osumi-Sutherland, Bruce W. Herr II, et al. 2021. “Anatomical Structures, Cell Types and Biomarkers of the Human Reference Atlas.” *Nature Cell Biology* 23 (11): 1117–28. https://doi.org/10.1038/s41556-021-00788-6.<br>* Golbreich, Christine, Julien Grosjean, and Stefan Jacques Darmoni. 2013. “The Foundational Model of Anatomy in OWL 2 and Its Use.” *Artificial Intelligence in Medicine* 57 (2): 119–32. https://doi.org/10.1016/j.artmed.2012.11.002.<br>* Rosse, Cornelius, and José L.V. Mejino. 2003. “A Reference Ontology for Biomedical Informatics: The Foundational Model of Anatomy.” *Journal of Biomedical Informatics* 36 (6): 478–500. https://doi.org/10.1016/j.jbi.2003.11.007.<br>* Mungall, C. J., C. Torniai, G. V. Gkoutos, S. E. Lewis, and M. A. Haendel. 2012. “Uberon, an Integrative Multi-Species Anatomy Ontology.” *Genome Biol* 13 (1): R5. https://doi.org/10.1186/gb-2012-13-1-r5.","journal":"The Human BioMolecular Atlas Program (HuBMAP) Reference Repository","year":2025,"id":586403,"datarank":0.0,"base_score":0.0,"endowment":0.0,"self_citation_contribution":0.0,"citation_network_contribution":0.0,"self_endowment_contribution":0.0,"citer_contribution":0.0,"corpus_percentile":0.0,"corpus_rank":10322,"citation_count":0,"citer_count":0,"citers_with_citation_signal":0,"citers_with_endowment":0,"datacite_reuse_total":0,"is_dataset":true,"is_dataset_confidence":0.9323,"is_data_producer":false,"deposit_databanks":null,"is_oa":true,"file_count":0,"downloads":0,"has_version_chain":false,"published_date":"2025-01-01","fair_score":null,"fair_percentile":null,"algorithm_id":"datarank_citation_only_1hop_v6","ranking_scope":"data_only","authors":[{"id":1500359,"name":"Schlehlein, Heidi","orcid":"0000-0002-3333-5646","position":1,"is_corresponding":false},{"id":556229,"name":"Bruce W. Herr","orcid":"0000-0002-6703-7647","position":2,"is_corresponding":false},{"id":20958,"name":"Katy Börner","orcid":"0000-0002-3321-6137","position":3,"is_corresponding":false},{"id":303981,"name":"Ellen M. Quardokus","orcid":"0000-0001-7655-4833","position":0,"is_corresponding":true}],"reference_count":0,"raw_metadata":{"citation_network_status":"fetched"},"created_at":"2026-07-19T02:59:28.666390Z","pmid":null,"pmcid":null,"fwci":null,"citation_percentile":null,"influential_citations":0,"oa_status":null,"license":null,"views":0,"total_file_size_bytes":0,"version_count":0,"fair_f":null,"fair_a":null,"fair_i":null,"fair_r":null,"fair_zscore":null,"fair_rationale":null,"fair_model":null,"fair_agent_version":null,"fair_fulltext_source":null,"fair_has_llm":null,"fair_computed_at":null,"clinical_trials":[],"software_tools":[],"db_accessions":[],"linked_datasets":[],"topics":[]}