{"doi":"10.18653/v1/2020.bionlp-1.7","title":"A BERT-based One-Pass Multi-Task Model for Clinical Temporal Relation Extraction","abstract":"Recently BERT has achieved a state-of-theart performance in temporal relation extraction from clinical Electronic Medical Records text. However, the current approach is inefficient as it requires multiple passes through each input sequence. We extend a recently-proposed one-pass model for relation classification to a one-pass model for relation extraction. We augment this framework by introducing global embeddings to help with long-distance relation inference, and by multi-task learning to increase model performance and generalizability. Our proposed model produces results on par with the state-of-the-art in temporal relation extraction on the THYME corpus and is much \"greener\" in computational cost.","journal":"UA Campus Repository (The University of Arizona)","year":2020,"id":119194,"datarank":0.4887144807032224,"base_score":3.258096538021482,"endowment":3.258096538021482,"self_citation_contribution":0.4887144807032224,"citation_network_contribution":0.0,"self_endowment_contribution":0.4887144807032224,"citer_contribution":0.0,"corpus_percentile":null,"corpus_rank":null,"citation_count":25,"citer_count":0,"citers_with_citation_signal":0,"citers_with_endowment":0,"datacite_reuse_total":0,"is_dataset":false,"is_dataset_confidence":0.9399,"is_data_producer":false,"deposit_databanks":null,"is_oa":true,"file_count":0,"downloads":0,"has_version_chain":false,"published_date":"2020-01-01","fair_score":null,"fair_percentile":null,"algorithm_id":"datarank_citation_only_1hop_v6","ranking_scope":"data_only","authors":[{"id":553683,"name":"T. Miller","orcid":"0000-0002-5585-7736","position":1,"is_corresponding":false},{"id":318129,"name":"Dmitriy Dligach","orcid":"0000-0002-2585-2707","position":2,"is_corresponding":false},{"id":318130,"name":"Farig Sadeque","orcid":"0000-0001-6797-7826","position":3,"is_corresponding":false},{"id":318128,"name":"Steven Bethard","orcid":"0000-0001-9560-6491","position":4,"is_corresponding":false},{"id":318131,"name":"Guergana Savova","orcid":"0000-0002-5887-200X","position":5,"is_corresponding":false},{"id":318127,"name":"Chen Lin","orcid":"0000-0002-2275-997X","position":0,"is_corresponding":true}],"reference_count":29,"raw_metadata":{"citation_network_status":"fetched"},"created_at":"2026-07-18T23:14:08.313144Z","pmid":null,"pmcid":null,"fwci":null,"citation_percentile":null,"influential_citations":0,"oa_status":null,"license":null,"views":0,"total_file_size_bytes":0,"version_count":0,"fair_f":null,"fair_a":null,"fair_i":null,"fair_r":null,"fair_zscore":null,"fair_rationale":null,"fair_model":null,"fair_agent_version":null,"fair_fulltext_source":null,"fair_has_llm":null,"fair_computed_at":null,"clinical_trials":[],"software_tools":[],"db_accessions":[],"linked_datasets":[],"topics":[]}