{"doi":"10.17615/mkb6-1p15","title":"HUGIn: Hi-C Unifying Genomic Interrogator","abstract":"Motivation: High throughput chromatin conformation capture (3C) technologies, such as Hi-C and ChIA-PET, have the potential to elucidate the functional roles of non-coding variants. However, most of published genome-wide unbiased chromatin organization studies have used cultured cell lines, limiting their generalizability. Results: We developed a web browser, HUGIn, to visualize Hi-C data generated from 21 human primary tissues and cell lines. HUGIn enables assessment of chromatin contacts both constitutive across and specific to tissue(s) and/or cell line(s) at any genomic loci, including GWAS SNPs, eQTLs and cis-regulatory elements, facilitating the understanding of both GWAS and eQTL results and functional genomics data. Availability and implementation: HUGIn is available at http://yunliweb.its.unc.edu/HUGIn. Contact: yunli@med.unc.edu or hum@ccf.org. Supplementary information: Supplementary data are available at Bioinformatics online.","journal":"UNC Libraries","year":2020,"id":140632,"datarank":0.0,"base_score":0.0,"endowment":0.0,"self_citation_contribution":0.0,"citation_network_contribution":0.0,"self_endowment_contribution":0.0,"citer_contribution":0.0,"corpus_percentile":null,"corpus_rank":null,"citation_count":0,"citer_count":0,"citers_with_citation_signal":0,"citers_with_endowment":0,"datacite_reuse_total":0,"is_dataset":false,"is_dataset_confidence":0.9231,"is_data_producer":false,"deposit_databanks":null,"is_oa":true,"file_count":0,"downloads":0,"has_version_chain":false,"published_date":"2020-01-01","fair_score":null,"fair_percentile":null,"algorithm_id":"datarank_citation_only_1hop_v6","ranking_scope":"data_only","authors":[{"id":11271,"name":"Karen L. Mohlke","orcid":"0000-0001-6721-153X","position":1,"is_corresponding":false},{"id":547231,"name":"Xu Zheng","orcid":"0009-0006-1257-3027","position":2,"is_corresponding":false},{"id":136223,"name":"Bing Ren","orcid":"0000-0002-5435-1127","position":3,"is_corresponding":false},{"id":594876,"name":"Ming Hu","orcid":"0000-0002-8209-0139","position":4,"is_corresponding":false},{"id":595384,"name":"Joshua S. Martin","orcid":null,"position":5,"is_corresponding":false},{"id":25010,"name":"Alex P. Reiner","orcid":"0000-0002-1427-4470","position":6,"is_corresponding":false},{"id":605452,"name":"Yun Li","orcid":"0000-0002-8426-565X","position":7,"is_corresponding":false},{"id":213,"name":"Patrick F. Sullivan","orcid":"0000-0002-6619-873X","position":0,"is_corresponding":true}],"reference_count":0,"raw_metadata":null,"created_at":"2026-07-18T23:17:20.701143Z","pmid":null,"pmcid":null,"fwci":null,"citation_percentile":null,"influential_citations":0,"oa_status":null,"license":null,"views":0,"total_file_size_bytes":0,"version_count":0,"fair_f":null,"fair_a":null,"fair_i":null,"fair_r":null,"fair_zscore":null,"fair_rationale":null,"fair_model":null,"fair_agent_version":null,"fair_fulltext_source":null,"fair_has_llm":null,"fair_computed_at":null,"clinical_trials":[],"software_tools":[],"db_accessions":[],"linked_datasets":[],"topics":[]}