{"doi":"10.1186/gb-2003-4-5-p3","title":"DAVID: Database for Annotation, Visualization, and Integrated Discovery","abstract":"<h4>Background</h4>Functional annotation of differentially expressed genes is a necessary and critical step in the analysis of microarray data. The distributed nature of biological knowledge frequently requires researchers to navigate through numerous web-accessible databases gathering information one gene at a time. A more judicious approach is to provide query-based access to an integrated database that disseminates biologically rich information across large datasets and displays graphic summaries of functional information.<h4>Results</h4>Database for Annotation, Visualization, and Integrated Discovery (DAVID; http://www.david.niaid.nih.gov) addresses this need via four web-based analysis modules: 1) Annotation Tool - rapidly appends descriptive data from several public databases to lists of genes; 2) GoCharts - assigns genes to Gene Ontology functional categories based on user selected classifications and term specificity level; 3) KeggCharts - assigns genes to KEGG metabolic processes and enables users to view genes in the context of biochemical pathway maps; and 4) DomainCharts - groups genes according to PFAM conserved protein domains.<h4>Conclusions</h4>Analysis results and graphical displays remain dynamically linked to primary data and external data repositories, thereby furnishing in-depth as well as broad-based data coverage. The functionality provided by DAVID accelerates the analysis of genome-scale datasets by facilitating the transition from data collection to biological meaning.","journal":"Genome Biology","year":2003,"id":6570,"datarank":23.698393693573006,"base_score":9.146121799649531,"endowment":9.146121799649531,"self_citation_contribution":1.37191826994743,"citation_network_contribution":22.326475423625578,"self_endowment_contribution":1.37191826994743,"citer_contribution":22.326475423625578,"corpus_percentile":99.9,"corpus_rank":1489,"citation_count":9377,"citer_count":191,"citers_with_citation_signal":191,"citers_with_endowment":191,"datacite_reuse_total":0,"is_dataset":true,"is_oa":true,"file_count":0,"downloads":0,"has_version_chain":false,"published_date":"2003-04-03","authors":[{"id":60621,"name":"Brad T. Sherman","orcid":"0000-0001-5815-7359","position":1,"is_corresponding":false},{"id":60622,"name":"Douglas A Hosack","orcid":null,"position":2,"is_corresponding":false},{"id":50203,"name":"JUN YANG","orcid":"0000-0002-7920-2777","position":3,"is_corresponding":false},{"id":60623,"name":"Wei Gao","orcid":"0000-0002-1391-8334","position":4,"is_corresponding":false},{"id":60624,"name":"H. Clifford Lane","orcid":"0000-0001-9509-1045","position":5,"is_corresponding":false},{"id":60625,"name":"Richard A. Lempicki","orcid":"0000-0002-7059-409X","position":6,"is_corresponding":false},{"id":60620,"name":"Glynn Dennis","orcid":null,"position":0,"is_corresponding":true}],"reference_count":13,"raw_metadata":{"citation_network_status":"fetched"},"created_at":"2026-03-01T18:20:47.508186Z","pmid":null,"pmcid":null,"fwci":null,"citation_percentile":null,"influential_citations":0,"oa_status":null,"license":null,"views":0,"total_file_size_bytes":0,"version_count":0,"clinical_trials":[],"software_tools":[],"db_accessions":[],"linked_datasets":[],"topics":[]}