{"doi":"10.1111/1758-2229.12575","title":"Yeasts dominate soil fungal communities in three lowland Neotropical rainforests","abstract":"<jats:title>Summary</jats:title>\n                  <jats:p>Forest soils typically harbour a vast diversity of fungi, but are usually dominated by filamentous (hyphae‐forming) taxa. Compared to temperate and boreal forests, though, we have limited knowledge about the fungal diversity in tropical rainforest soils. Here we show, by environmental metabarcoding of soil samples collected in three Neotropical rainforests, that Yeasts dominate the fungal communities in terms of the number of sequencing reads and OTUs. These unicellular forms are commonly found in aquatic environments, and their hyperdiversity may be the result of frequent inundation combined with numerous aquatic microenvironments in these rainforests. Other fungi that are frequent in aquatic environments, such as the abundant Chytridiomycotina, were also detected. While there was low similarity in OTU composition within and between the three rainforests, the fungal communities in Central America were more similar to each other than the communities in South America, reflecting a general biogeographic pattern also seen in animals, plants and protists.</jats:p>","journal":"Environmental Microbiology Reports","year":2017,"id":653088,"datarank":0.4335557636844247,"base_score":2.8903717578961645,"endowment":2.8903717578961645,"self_citation_contribution":0.4335557636844247,"citation_network_contribution":0.0,"self_endowment_contribution":0.4335557636844247,"citer_contribution":0.0,"corpus_percentile":null,"corpus_rank":null,"citation_count":17,"citer_count":0,"citers_with_citation_signal":0,"citers_with_endowment":0,"datacite_reuse_total":0,"is_dataset":false,"is_dataset_confidence":null,"is_data_producer":false,"deposit_databanks":null,"is_oa":false,"file_count":0,"downloads":0,"has_version_chain":false,"published_date":null,"fair_score":null,"fair_percentile":null,"algorithm_id":"datarank_citation_only_1hop_v6","ranking_scope":"data_only","authors":[{"id":1703973,"name":"Håvard Kauserud","orcid":null,"position":1,"is_corresponding":false},{"id":1251233,"name":"David Bass","orcid":"0000-0002-8494-5276","position":2,"is_corresponding":false},{"id":1703974,"name":"Jordan Mayor","orcid":null,"position":3,"is_corresponding":false},{"id":12108,"name":"Frédéric Mahé","orcid":"0000-0002-2808-0984","position":4,"is_corresponding":false},{"id":1703972,"name":"Micah Dunthorn","orcid":"0000-0003-1376-4109","position":0,"is_corresponding":false}],"reference_count":0,"raw_metadata":{"has_enrichment":true,"resolved":true,"title":"Yeasts dominate soil fungal communities in three lowland Neotropical rainforests","abstract":"<jats:title>Summary</jats:title>\n                  <jats:p>Forest soils typically harbour a vast diversity of fungi, but are usually dominated by filamentous (hyphae‐forming) taxa. Compared to temperate and boreal forests, though, we have limited knowledge about the fungal diversity in tropical rainforest soils. Here we show, by environmental metabarcoding of soil samples collected in three Neotropical rainforests, that Yeasts dominate the fungal communities in terms of the number of sequencing reads and OTUs. These unicellular forms are commonly found in aquatic environments, and their hyperdiversity may be the result of frequent inundation combined with numerous aquatic microenvironments in these rainforests. Other fungi that are frequent in aquatic environments, such as the abundant Chytridiomycotina, were also detected. While there was low similarity in OTU composition within and between the three rainforests, the fungal communities in Central America were more similar to each other than the communities in South America, reflecting a general biogeographic pattern also seen in animals, plants and protists.</jats:p>","is_dataset_classified":null,"base_score":2.8903717578961645,"endowment":2.8903717578961645,"datacite_reuse_total":0,"file_count":0,"downloads":0,"views":0,"has_version_chain":false,"is_dataset":false,"is_oa":false,"pmid":"28799713","pmcid":null,"openalex_id":"https://openalex.org/W2949700945","authors":[],"funders":[{"funder_name":"Deutsche Forschungsgemeinschaft","grant_id":"DU1319/1–1","title":null},{"funder_name":"National Science Foundation","grant_id":"1012703","title":"International Research Fellowship Program: Does the Foliar Nitrogen Isoptope Variability in Rain Forest Trees Reflect Niche Partitioning, Biophysical Processes or Climate?"},{"funder_name":"Deutsche Forschungsgemeinschaft","grant_id":"unidentified","title":"unidentified"},{"funder_name":"Institute for Tropical and Subtropical Crops, Agricultural Research Council","grant_id":"","title":null}],"total_grants":4,"fwci":5.2507,"citation_percentile":0.94822062,"influential_citations":0,"citation_trend":[{"year":2018,"count":3},{"year":2019,"count":1},{"year":2020,"count":7},{"year":2021,"count":3},{"year":2024,"count":1},{"year":2025,"count":1},{"year":2026,"count":1}],"oa_status":"closed","license":"CC BY ND","oa_locations":[{"url":"https://api.wiley.com/onlinelibrary/tdm/v1/articles/10.1111%2F1758-2229.12575","host_type":"publisher"},{"url":"https://sfamjournals.onlinelibrary.wiley.com/doi/pdf/10.1111/1758-2229.12575","host_type":"publisher"},{"url":"https://doi.org/10.1111/1758-2229.12575","host_type":"journal"},{"url":"https://pubmed.ncbi.nlm.nih.gov/28799713","host_type":"repository"},{"url":"http://agritrop.cirad.fr/590738/","host_type":"repository"},{"url":"https://www.biorxiv.org/content/biorxiv/early/2017/05/15/138057.full.pdf","host_type":"Unpaywall"},{"url":"https://doi.org/10.1101/138057","host_type":""},{"url":"https://dx.doi.org/10.1101/138057","host_type":""},{"url":"https://dx.doi.org/10.1111/1758-2229.12575","host_type":""},{"url":"http://dx.doi.org/10.1101/138057","host_type":""}],"fields_of_study":["Mycorrhizal Fungi and Plant Interactions","Plant Pathogens and Fungal Diseases","Environmental DNA in Biodiversity Studies","0301 basic medicine","0303 health sciences","03 medical and health sciences","Biodiversity","Fungi","Metagenome","Metagenomics","Phylogeography","Rainforest","Soil Microbiology","Tropical Climate"],"mesh_terms":["Fungi","Soil Microbiology","Tropical Climate","Biodiversity","Metagenome","Metagenomics","Phylogeography","Rainforest"],"keywords":["Rainforest","Temperate rainforest","Biology","Fungal Diversity","Ecology","Tropical rainforest","Taxon","Ecosystem","Tropical Climate","Fungi","P34 - Biologie du sol","Biodiversity","Phylogeography","K01 - Foresterie - Considérations générales","http://aims.fao.org/aos/agrovoc/c_1434","Metagenome","http://aims.fao.org/aos/agrovoc/c_7253","Metagenomics","Soil Microbiology"],"sdg_mappings":[{"sdg_number":15,"sdg_label":"15. 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