{"doi":"10.1101/2021.08.29.458140","title":"BiomeHorizon: visualizing microbiome time series data in R","abstract":"Abstract Summary A key aspect of microbiome research is analysis of longitudinal dynamics using time series data. A method to visualize both the proportional and absolute change in the abundance of multiple taxa across multiple subjects over time is needed. We developed BiomeHorizon , an open-source R package that visualizes longitudinal compositional microbiome data using horizon plots. Availability and Implementation BiomeHorizon is available at https://github.com/blekhmanlab/biomehorizon/ and released under the MIT license. A guide with step-by-step instructions for using the package is provided at https://blekhmanlab.github.io/biomehorizon/ . The guide also provides code to reproduce all plots in this manuscript. Contact lgrienei@umn.edu , blekhman@umn.edu , iafink@uchicago.edu Supplementary information None","journal":"bioRxiv (Cold Spring Harbor Laboratory)","year":2021,"id":217802,"datarank":0.0,"base_score":0.0,"endowment":0.0,"self_citation_contribution":0.0,"citation_network_contribution":0.0,"self_endowment_contribution":0.0,"citer_contribution":0.0,"corpus_percentile":null,"corpus_rank":null,"citation_count":3,"citer_count":0,"citers_with_citation_signal":0,"citers_with_endowment":0,"datacite_reuse_total":0,"is_dataset":false,"is_dataset_confidence":0.9172,"is_data_producer":false,"deposit_databanks":null,"is_oa":true,"file_count":0,"downloads":0,"has_version_chain":false,"published_date":"2021-01-01","fair_score":null,"fair_percentile":null,"algorithm_id":"datarank_citation_only_1hop_v6","ranking_scope":"data_only","authors":[{"id":20923,"name":"Richard J. Abdill","orcid":"0000-0001-9565-5832","position":1,"is_corresponding":false},{"id":20926,"name":"Ran Blekhman","orcid":"0000-0003-3218-613X","position":2,"is_corresponding":false},{"id":494440,"name":"Laura Grieneisen","orcid":"0000-0001-7286-5001","position":3,"is_corresponding":false},{"id":815087,"name":"Isaac Fink","orcid":"0000-0003-3930-029X","position":0,"is_corresponding":true}],"reference_count":13,"raw_metadata":null,"created_at":"2026-07-18T23:53:24.683898Z","pmid":null,"pmcid":null,"fwci":null,"citation_percentile":null,"influential_citations":0,"oa_status":null,"license":null,"views":0,"total_file_size_bytes":0,"version_count":0,"fair_f":null,"fair_a":null,"fair_i":null,"fair_r":null,"fair_zscore":null,"fair_rationale":null,"fair_model":null,"fair_agent_version":null,"fair_fulltext_source":null,"fair_has_llm":null,"fair_computed_at":null,"clinical_trials":[],"software_tools":[],"db_accessions":[],"linked_datasets":[],"topics":[]}