{"doi":"10.1101/2020.02.12.946129","title":"The C-terminus and Third Cytoplasmic Loop Cooperatively Activate Mouse Melanopsin Phototransduction","abstract":"ABSTRACT Melanopsin, an atypical vertebrate visual pigment, mediates non-image forming light responses including circadian photoentrainment and pupillary light reflexes, and contrast detection for image formation. Melanopsin-expressing intrinsically photosensitive retinal ganglion cells (ipRGCs), are characterized by sluggish activation and deactivation of their light responses. The molecular determinants of mouse melanopsin’s deactivation have been characterized (i.e. C-terminal phosphorylation and β-arrestin binding), but a detailed analysis of melanopsin’s activation is lacking. We propose that an extended 3 rd cytoplasmic loop is adjacent to the proximal C-terminal region of mouse melanopsin in the inactive conformation which is stabilized by ionic interaction of these two regions. This model is supported by site-directed spin labeling and electron paramagnetic resonance (EPR) spectroscopy of melanopsin, the results of which suggests a high degree of steric freedom at the 3 rd cytoplasmic loop, which is increased upon C-terminus truncation, supporting the idea that these two regions are close in 3-dimensional space in wild-type melanopsin. To test for a functionally critical C-terminal conformation, calcium imaging of melanopsin mutants including a proximal C-terminus truncation (at residue 365) and proline mutation of this proximal region (H377P, L380P, Y382P) delayed melanopsin’s activation rate. Mutation of all potential phosphorylation sites, including a highly conserved tyrosine residue (Y382), into alanines also delayed the activation rate. A comparison of mouse melanopsin with armadillo melanopsin—which has substitutions of various potential phosphorylation sites and a substitution of the conserved tyrosine—indicates that substitution of these potential phosphorylation sites and the tyrosine residue result in dramatically slower activation kinetics, a finding that also supports the role of phosphorylation in signaling activation. We therefore propose that melanopsin’s C-terminus is proximal to intracellular loop 3 and C-terminal phosphorylation permits the ionic interaction between these two regions, thus forming a stable structural conformation that is critical for initiating G-protein signaling. STATEMENT OF SIGNIFICANCE Melanopsin is an important visual pigment in the mammalian retina that mediates non-image forming responses such as circadian photoentrainment and pupil constriction, and supports contrast detection for image formation. In this study, we detail two critical structural features of mouse melanopsin—its 3 rd cytoplasmic loop and C-terminus—that are important in the activation of melanopsin’s light responses. Furthermore, we propose that these two regions directly participate in coupling mouse melanopsin to its G-protein. These findings contribute to further understanding of GPCR-G-protein coupling, and given recent findings suggesting flexibility of melanopsin signal transduction in the retina (possibly by coupling more than one G-protein type), these findings provide insight into the molecular basis of melanopsin function in the retina.","journal":"bioRxiv (Cold Spring Harbor Laboratory)","year":2020,"id":128913,"datarank":0.0,"base_score":0.0,"endowment":0.0,"self_citation_contribution":0.0,"citation_network_contribution":0.0,"self_endowment_contribution":0.0,"citer_contribution":0.0,"corpus_percentile":null,"corpus_rank":null,"citation_count":0,"citer_count":0,"citers_with_citation_signal":0,"citers_with_endowment":0,"datacite_reuse_total":0,"is_dataset":false,"is_dataset_confidence":0.9519,"is_data_producer":false,"deposit_databanks":null,"is_oa":true,"file_count":0,"downloads":0,"has_version_chain":false,"published_date":"2020-01-01","fair_score":null,"fair_percentile":null,"algorithm_id":"datarank_citation_only_1hop_v6","ranking_scope":"data_only","authors":[{"id":580155,"name":"Stephen T. Petr","orcid":null,"position":1,"is_corresponding":false},{"id":579655,"name":"Matthew P. Donohue","orcid":"0000-0003-4117-0930","position":2,"is_corresponding":false},{"id":579656,"name":"Robin J. Bailey","orcid":"0000-0002-4752-5192","position":3,"is_corresponding":false},{"id":580156,"name":"Meheret Gebreeziabher","orcid":null,"position":4,"is_corresponding":false},{"id":291700,"name":"Evan G. Cameron","orcid":"0000-0003-0364-5309","position":5,"is_corresponding":false},{"id":580157,"name":"Julia Wolf","orcid":null,"position":6,"is_corresponding":false},{"id":579657,"name":"Veronika A. Szalai","orcid":"0000-0002-1115-2849","position":7,"is_corresponding":false},{"id":431749,"name":"Phyllis R. Robinson","orcid":"0000-0002-3828-8826","position":8,"is_corresponding":false},{"id":431747,"name":"Juan C. Valdez‐Lopez","orcid":"0000-0003-3617-171X","position":0,"is_corresponding":true}],"reference_count":68,"raw_metadata":null,"created_at":"2026-07-18T23:15:42.522809Z","pmid":null,"pmcid":null,"fwci":null,"citation_percentile":null,"influential_citations":0,"oa_status":null,"license":null,"views":0,"total_file_size_bytes":0,"version_count":0,"fair_f":null,"fair_a":null,"fair_i":null,"fair_r":null,"fair_zscore":null,"fair_rationale":null,"fair_model":null,"fair_agent_version":null,"fair_fulltext_source":null,"fair_has_llm":null,"fair_computed_at":null,"clinical_trials":[],"software_tools":[],"db_accessions":[],"linked_datasets":[],"topics":[]}