{"doi":"10.1093/nar/gkab314","title":"Mol* Viewer: modern web app for 3D visualization and analysis of large biomolecular structures","abstract":"Large biomolecular structures are being determined experimentally on a daily basis using established techniques such as crystallography and electron microscopy. In addition, emerging integrative or hybrid methods (I/HM) are producing structural models of huge macromolecular machines and assemblies, sometimes containing 100s of millions of non-hydrogen atoms. The performance requirements for visualization and analysis tools delivering these data are increasing rapidly. Significant progress in developing online, web-native three-dimensional (3D) visualization tools was previously accomplished with the introduction of the LiteMol suite and NGL Viewers. Thereafter, Mol* development was jointly initiated by PDBe and RCSB PDB to combine and build on the strengths of LiteMol (developed by PDBe) and NGL (developed by RCSB PDB). The web-native Mol* Viewer enables 3D visualization and streaming of macromolecular coordinate and experimental data, together with capabilities for displaying structure quality, functional, or biological context annotations. High-performance graphics and data management allows users to simultaneously visualise up to hundreds of (superimposed) protein structures, stream molecular dynamics simulation trajectories, render cell-level models, or display huge I/HM structures. It is the primary 3D structure viewer used by PDBe and RCSB PDB. It can be easily integrated into third-party services. Mol* Viewer is open source and freely available at https://molstar.org/.","journal":"Nucleic Acids Research","year":2021,"id":145037,"datarank":1.0628852196548417,"base_score":7.085901464365611,"endowment":7.085901464365611,"self_citation_contribution":1.0628852196548417,"citation_network_contribution":0.0,"self_endowment_contribution":1.0628852196548417,"citer_contribution":0.0,"corpus_percentile":null,"corpus_rank":null,"citation_count":1194,"citer_count":0,"citers_with_citation_signal":0,"citers_with_endowment":0,"datacite_reuse_total":0,"is_dataset":false,"is_dataset_confidence":0.9507,"is_data_producer":false,"deposit_databanks":null,"is_oa":true,"file_count":0,"downloads":0,"has_version_chain":false,"published_date":"2021-01-01","fair_score":null,"fair_percentile":null,"algorithm_id":"datarank_citation_only_1hop_v6","ranking_scope":"data_only","authors":[{"id":339379,"name":"Sebastian Bittrich","orcid":"0000-0003-3576-0387","position":1,"is_corresponding":false},{"id":33975,"name":"Mandar Deshpande","orcid":"0000-0002-9043-7665","position":2,"is_corresponding":false},{"id":484558,"name":"Radka Svobodová Vařeková","orcid":"0000-0002-3840-8760","position":3,"is_corresponding":false},{"id":36001,"name":"Karel Berka","orcid":"0000-0001-9472-2589","position":4,"is_corresponding":false},{"id":614579,"name":"Václav Bazgier","orcid":"0000-0003-3393-3010","position":5,"is_corresponding":false},{"id":33988,"name":"Sameer Velankar","orcid":"0000-0002-8439-5964","position":6,"is_corresponding":false},{"id":23506,"name":"S.K. Burley","orcid":"0000-0002-2487-9713","position":7,"is_corresponding":false},{"id":484557,"name":"Jaroslav Koča","orcid":"0000-0002-2780-4901","position":8,"is_corresponding":false},{"id":339380,"name":"Alexander Rose","orcid":"0000-0002-0893-5551","position":9,"is_corresponding":false},{"id":484556,"name":"David Sehnal","orcid":"0000-0002-0682-3089","position":0,"is_corresponding":true}],"reference_count":35,"raw_metadata":{"citation_network_status":"fetched"},"created_at":"2026-07-18T23:41:52.374756Z","pmid":"33956157","pmcid":null,"fwci":null,"citation_percentile":null,"influential_citations":0,"oa_status":null,"license":null,"views":0,"total_file_size_bytes":0,"version_count":0,"fair_f":null,"fair_a":null,"fair_i":null,"fair_r":null,"fair_zscore":null,"fair_rationale":null,"fair_model":null,"fair_agent_version":null,"fair_fulltext_source":null,"fair_has_llm":null,"fair_computed_at":null,"clinical_trials":[],"software_tools":[],"db_accessions":[],"linked_datasets":[],"topics":[]}