{"doi":"10.1093/nar/gkaa1070","title":"The UCSC Genome Browser database: 2021 update","abstract":null,"journal":"Nucleic Acids Research","year":2020,"id":13442,"datarank":6.229012851457346,"base_score":6.470799503782602,"endowment":6.470799503782602,"self_citation_contribution":0.9706199255673904,"citation_network_contribution":5.258392925889956,"self_endowment_contribution":0.9706199255673904,"citer_contribution":5.258392925889956,"corpus_percentile":96.89022975168253,"corpus_rank":403,"citation_count":645,"citer_count":100,"citers_with_citation_signal":100,"citers_with_endowment":100,"datacite_reuse_total":0,"is_dataset":true,"is_dataset_confidence":0.9445,"is_data_producer":false,"deposit_databanks":null,"is_oa":true,"file_count":0,"downloads":0,"has_version_chain":false,"published_date":"2020-01-01","fair_score":84.1667,"fair_percentile":88.7,"algorithm_id":"datarank_citation_only_1hop_v6","ranking_scope":"data_only","authors":[{"id":20040,"name":"Ann S. Zweig","orcid":null,"position":1,"is_corresponding":false},{"id":109828,"name":"Matthew L Speir","orcid":"0000-0002-2035-1129","position":2,"is_corresponding":false},{"id":109829,"name":"Daniel Schmelter","orcid":"0000-0002-7311-0599","position":3,"is_corresponding":false},{"id":19975,"name":"Kate R. Rosenbloom","orcid":"0000-0001-8799-4826","position":4,"is_corresponding":false},{"id":109830,"name":"Brian J. Raney","orcid":"0000-0002-9708-1390","position":5,"is_corresponding":false},{"id":29375,"name":"Conner C. Powell","orcid":null,"position":6,"is_corresponding":false},{"id":109831,"name":"Luis R Nassar","orcid":"0000-0002-6706-2586","position":7,"is_corresponding":false},{"id":109832,"name":"Nathan D Maulding","orcid":"0000-0002-8175-4538","position":8,"is_corresponding":false},{"id":29374,"name":"Christopher M. Lee","orcid":"0000-0001-6574-3567","position":9,"is_corresponding":false},{"id":109833,"name":"Brian T. Lee","orcid":"0000-0001-6382-9738","position":10,"is_corresponding":false},{"id":20036,"name":"Angie S. Hinrichs","orcid":"0000-0002-1697-1130","position":11,"is_corresponding":false},{"id":109834,"name":"Alastair Charles Fyfe","orcid":null,"position":12,"is_corresponding":false},{"id":109835,"name":"Jason D. Fernandes","orcid":"0000-0002-8625-1796","position":13,"is_corresponding":false},{"id":16842,"name":"Mark Diekhans","orcid":"0000-0002-0430-0989","position":14,"is_corresponding":false},{"id":109836,"name":"Hiram Clawson","orcid":"0000-0002-0480-0545","position":15,"is_corresponding":false},{"id":109837,"name":"Jonathan D. Casper","orcid":"0009-0009-5722-1916","position":16,"is_corresponding":false},{"id":109838,"name":"Anna Benet‐Pagès","orcid":"0000-0001-6770-1299","position":17,"is_corresponding":false},{"id":20043,"name":"Galt P Barber","orcid":null,"position":18,"is_corresponding":false},{"id":109463,"name":"David Haussler","orcid":"0000-0003-1533-4575","position":19,"is_corresponding":false},{"id":20044,"name":"Robert M. Kuhn","orcid":"0000-0001-8103-7793","position":20,"is_corresponding":false},{"id":24474,"name":"Maximilian Haeussler","orcid":"0000-0001-8721-8253","position":21,"is_corresponding":false},{"id":109839,"name":"W. James Kent","orcid":null,"position":22,"is_corresponding":false},{"id":109827,"name":"Jairo Navarro Gonzalez","orcid":"0000-0003-4022-4829","position":0,"is_corresponding":true}],"reference_count":49,"raw_metadata":null,"created_at":"2026-04-10T12:11:23.305991Z","pmid":"33221922","pmcid":"PMC7779060","fwci":null,"citation_percentile":null,"influential_citations":0,"oa_status":"gold","license":"cc-by","views":0,"total_file_size_bytes":0,"version_count":0,"fair_f":100.0,"fair_a":70.0,"fair_i":100.0,"fair_r":66.6667,"fair_zscore":0.5146,"fair_rationale":{"fair_score":84.17,"has_llm":false,"dimensions":{"F":{"name":"Findable","score":100.0,"criteria":[{"key":"f_has_doi","label":"Has a persistent DOI","kind":"deterministic","weight":1.0,"fraction":1.0,"signal":"DOI present","rationale":null},{"key":"f_repository_presence","label":"Indexed in repositories / literature DBs","kind":"deterministic","weight":1.0,"fraction":1.0,"signal":"datacite=25, pmcid=True, pmid=True","rationale":null},{"key":"f_persistent_ids","label":"Resolvable scholarly identifiers (OpenAlex)","kind":"deterministic","weight":0.5,"fraction":1.0,"signal":"OpenAlex id present","rationale":null}]},"A":{"name":"Accessible","score":70.0,"criteria":[{"key":"a_open_access","label":"Open Access / files deposited","kind":"deterministic","weight":1.5,"fraction":0.5,"signal":"files/OA location present but not flagged OA","rationale":null},{"key":"a_retrievable","label":"Free full text retrievable","kind":"deterministic","weight":1.0,"fraction":1.0,"signal":"15 OA location(s)","rationale":null}]},"I":{"name":"Interoperable","score":100.0,"criteria":[{"key":"i_linked_data","label":"Linked datasets / DataCite relations","kind":"deterministic","weight":1.0,"fraction":1.0,"signal":"linked_datasets=25, datacite=25","rationale":null},{"key":"i_standard_ids","label":"References data via standard accessions","kind":"deterministic","weight":1.0,"fraction":1.0,"signal":"accessions=1, trials=0","rationale":null}]},"R":{"name":"Reusable","score":66.67,"criteria":[{"key":"r_license","label":"Clear, open reuse license","kind":"deterministic","weight":1.5,"fraction":1.0,"signal":"open license (cc-by)","rationale":null},{"key":"r_downloads","label":"Demonstrated reuse (downloads)","kind":"deterministic","weight":0.5,"fraction":0.0,"signal":"downloads=0","rationale":null},{"key":"r_version","label":"Versioned / maintained","kind":"deterministic","weight":0.5,"fraction":0.0,"signal":"no version chain","rationale":null},{"key":"r_dataset","label":"Classified as a data resource","kind":"deterministic","weight":0.5,"fraction":1.0,"signal":"is_dataset","rationale":null}]}},"suggestions":["Maintain explicit versioning for the dataset.","Make the paper/data Open Access or deposit the files in an open repository."],"model":null,"agent_version":"fair_agent_v3","fulltext_source":"epmc_xml"},"fair_model":null,"fair_agent_version":"fair_agent_v3","fair_fulltext_source":"epmc_xml","fair_has_llm":false,"fair_computed_at":"2026-07-06T11:28:42.313092Z","clinical_trials":[],"software_tools":[],"db_accessions":[],"linked_datasets":[],"topics":[]}