{"doi":"10.1093/bioadv/vbad025","title":"promor: a comprehensive R package for label-free proteomics data analysis and predictive modeling","abstract":"<jats:title>Abstract</jats:title>\n                  <jats:sec>\n                    <jats:title>Summary</jats:title>\n                    <jats:p>We present promor, a comprehensive, user-friendly R package that streamlines label-free quantification proteomics data analysis and building machine learning-based predictive models with top protein candidates.</jats:p>\n                  </jats:sec>\n                  <jats:sec>\n                    <jats:title>Availability and implementation</jats:title>\n                    <jats:p>promor is freely available as an open source R package on the Comprehensive R Archive Network (CRAN) (https://CRAN.R-project.org/package=promor) and distributed under the Lesser General Public License (version 2.1 or later). Development version of promor is maintained on GitHub (https://github.com/caranathunge/promor) and additional documentation and tutorials are provided on the package website (https://caranathunge.github.io/promor/).</jats:p>\n                  </jats:sec>\n                  <jats:sec>\n                    <jats:title>Supplementary information</jats:title>\n                    <jats:p>Supplementary data are available at Bioinformatics Advances online.</jats:p>\n                  </jats:sec>","journal":"Bioinformatics Advances","year":2023,"id":594506,"datarank":0.40620753016533157,"base_score":2.70805020110221,"endowment":2.70805020110221,"self_citation_contribution":0.40620753016533157,"citation_network_contribution":0.0,"self_endowment_contribution":0.40620753016533157,"citer_contribution":0.0,"corpus_percentile":null,"corpus_rank":null,"citation_count":14,"citer_count":0,"citers_with_citation_signal":0,"citers_with_endowment":0,"datacite_reuse_total":0,"is_dataset":false,"is_dataset_confidence":null,"is_data_producer":false,"deposit_databanks":null,"is_oa":false,"file_count":0,"downloads":0,"has_version_chain":false,"published_date":null,"fair_score":null,"fair_percentile":null,"algorithm_id":"datarank_citation_only_1hop_v6","ranking_scope":"data_only","authors":[{"id":1521939,"name":"Sagar S Patel","orcid":null,"position":1,"is_corresponding":false},{"id":1066737,"name":"Lubna Pinky","orcid":"0000-0001-6826-3753","position":2,"is_corresponding":false},{"id":1521940,"name":"Vanessa L Correll","orcid":null,"position":3,"is_corresponding":false},{"id":1244418,"name":"Shimin Chen","orcid":"0000-0001-5289-1309","position":4,"is_corresponding":false},{"id":1521941,"name":"O John Semmes","orcid":null,"position":5,"is_corresponding":false},{"id":1521942,"name":"Robert K Armstrong","orcid":null,"position":6,"is_corresponding":false},{"id":1521943,"name":"C Donald Combs","orcid":null,"position":7,"is_corresponding":false},{"id":1521944,"name":"Julius O Nyalwidhe","orcid":null,"position":8,"is_corresponding":false},{"id":1521937,"name":"Chathurani Ranathunge","orcid":"0000-0003-1901-2119","position":0,"is_corresponding":false}],"reference_count":0,"raw_metadata":{"has_enrichment":true,"resolved":true,"title":"promor: a comprehensive R package for label-free proteomics data analysis and predictive modeling","abstract":"<jats:title>Abstract</jats:title>\n                  <jats:sec>\n                    <jats:title>Summary</jats:title>\n                    <jats:p>We present promor, a comprehensive, user-friendly R package that streamlines label-free quantification proteomics data analysis and building machine learning-based predictive models with top protein candidates.</jats:p>\n                  </jats:sec>\n                  <jats:sec>\n                    <jats:title>Availability and implementation</jats:title>\n                    <jats:p>promor is freely available as an open source R package on the Comprehensive R Archive Network (CRAN) (https://CRAN.R-project.org/package=promor) and distributed under the Lesser General Public License (version 2.1 or later). Development version of promor is maintained on GitHub (https://github.com/caranathunge/promor) and additional documentation and tutorials are provided on the package website (https://caranathunge.github.io/promor/).</jats:p>\n                  </jats:sec>\n                  <jats:sec>\n                    <jats:title>Supplementary information</jats:title>\n                    <jats:p>Supplementary data are available at Bioinformatics Advances online.</jats:p>\n                  </jats:sec>","is_dataset_classified":null,"base_score":0.0,"endowment":0.0,"datacite_reuse_total":0,"file_count":0,"downloads":0,"views":0,"has_version_chain":false,"is_dataset":false,"is_oa":false,"pmid":"36922981","pmcid":"PMC10010602","openalex_id":null,"authors":[],"funders":[{"funder_name":"NCI NIH HHS","grant_id":"U2C CA271894","title":null},{"funder_name":"Hampton Roads Biomedical Research Consortium","grant_id":"","title":null}],"total_grants":2,"fwci":null,"citation_percentile":null,"influential_citations":0,"citation_trend":[],"oa_status":"gold","license":"cc-by","oa_locations":[{"url":"https://academic.oup.com/bioinformaticsadvances/article-pdf/3/1/vbad025/49518443/vbad025.pdf","host_type":"publisher"},{"url":"https://academic.oup.com/bioinformaticsadvances/advance-article-pdf/doi/10.1093/bioadv/vbad025/49444773/vbad025.pdf","host_type":"publisher"},{"url":"https://academic.oup.com/bioinformaticsadvances/article-pdf/3/1/vbad025/49790649/vbad025.pdf","host_type":"publisher"},{"url":"https://pmc.ncbi.nlm.nih.gov/articles/PMC10010602/pdf/vbad025.pdf","host_type":"repository"},{"url":"https://europepmc.org/articles/PMC10010602","host_type":"Europe_PMC"},{"url":"https://europepmc.org/articles/PMC10010602?pdf=render","host_type":"Europe_PMC"}],"fields_of_study":[],"mesh_terms":[],"keywords":[],"sdg_mappings":[],"linked_datasets":[],"clinical_trials":[],"software_tools":[],"database_accessions":[{"name":"pxd"},{"name":"doi"}],"source":"live","citation_network_status":"fetched"},"created_at":"2026-07-27T14:46:14.414902Z","pmid":null,"pmcid":null,"fwci":null,"citation_percentile":null,"influential_citations":0,"oa_status":null,"license":null,"views":0,"total_file_size_bytes":0,"version_count":0,"fair_f":null,"fair_a":null,"fair_i":null,"fair_r":null,"fair_zscore":null,"fair_rationale":null,"fair_model":null,"fair_agent_version":null,"fair_fulltext_source":null,"fair_has_llm":null,"fair_computed_at":null,"clinical_trials":[],"software_tools":[],"db_accessions":[],"linked_datasets":[],"topics":[]}