{"doi":"10.1089/dna.2020.6227","title":"Genome-Wide Identification and Characterization of the IGT Gene Family in Allotetraploid Rapeseed (\n                    <i>Brassica napus</i>\n                    L.)","abstract":null,"journal":"DNA and Cell Biology","year":2021,"id":625734,"datarank":0.3596842909197557,"base_score":2.3978952727983707,"endowment":2.3978952727983707,"self_citation_contribution":0.3596842909197557,"citation_network_contribution":0.0,"self_endowment_contribution":0.3596842909197557,"citer_contribution":0.0,"corpus_percentile":null,"corpus_rank":null,"citation_count":10,"citer_count":0,"citers_with_citation_signal":0,"citers_with_endowment":0,"datacite_reuse_total":0,"is_dataset":false,"is_dataset_confidence":null,"is_data_producer":false,"deposit_databanks":null,"is_oa":false,"file_count":0,"downloads":0,"has_version_chain":false,"published_date":null,"fair_score":null,"fair_percentile":null,"algorithm_id":"datarank_citation_only_1hop_v6","ranking_scope":"data_only","authors":[{"id":1236179,"name":"Chun Zhang","orcid":"0000-0003-3565-8024","position":1,"is_corresponding":false},{"id":639900,"name":"Xiadong Wang","orcid":null,"position":2,"is_corresponding":false},{"id":869293,"name":"Xiaozhen Zhao","orcid":null,"position":3,"is_corresponding":false},{"id":919717,"name":"Feng Chen","orcid":"0000-0002-1800-7775","position":4,"is_corresponding":false},{"id":830037,"name":"Wei Zhang","orcid":"0000-0002-3575-6225","position":5,"is_corresponding":false},{"id":1618431,"name":"Maolong Hu","orcid":null,"position":6,"is_corresponding":false},{"id":1618432,"name":"Sanxiong Fu","orcid":null,"position":7,"is_corresponding":false},{"id":1451811,"name":"Bin Yi","orcid":"0000-0002-9239-8639","position":8,"is_corresponding":false},{"id":1162180,"name":"Jiefu Zhang","orcid":"0000-0002-6520-3912","position":9,"is_corresponding":false},{"id":327267,"name":"Chengming Sun","orcid":null,"position":0,"is_corresponding":false}],"reference_count":0,"raw_metadata":{"has_enrichment":true,"resolved":true,"title":"Genome-Wide Identification and Characterization of the IGT Gene Family in Allotetraploid Rapeseed (\n                    <i>Brassica napus</i>\n                    L.)","abstract":"IGT family genes function critically to regulate lateral organ orientation in plants. However, little information is available about this family of genes in Brassica napus. In this study, 27 BnIGT genes were identified on 16 chromosomes and divided into seven clades, namely LAZY1∼LAZY6 and TAC1 (Tiller Angle Control 1), based on their phylogenetic relationships. Duplication analysis revealed that 91.1% of the gene pairs were derived from whole-genome duplication. Most BnIGT genes had a similar structural pattern with one or two very short exons followed by a long and a shorter exon. Common and specific motifs were identified among the seven clades, and motif 1, containing the family-specific GφL(A/T)IGT sequence, was observed in all clades except LAZY5. Three types of cis-elements pertinent to transcription factor binding, light responses, and hormone signaling were detected in the BnIGT promoters. Intriguingly, more than half of the BnIGT genes exhibited no or very low expression in various tissues, and the LAZY1 and TAC1 clade members showed distinct tissue expression preferences. Coexpression analysis revealed that the LAZY1 members had strong associations with cell wall biosynthesis genes. This analysis provides a deeper understanding of the BnIGT gene family and will facilitate further deduction of their role in regulating plant architecture in B. napus.","is_dataset_classified":null,"base_score":2.3978952727983707,"endowment":2.3978952727983707,"datacite_reuse_total":0,"file_count":0,"downloads":0,"views":0,"has_version_chain":false,"is_dataset":false,"is_oa":false,"pmid":"33600242","pmcid":null,"openalex_id":"https://openalex.org/W3129501535","authors":[],"funders":[],"total_grants":0,"fwci":1.6968,"citation_percentile":0.84794483,"influential_citations":0,"citation_trend":[{"year":2022,"count":5},{"year":2023,"count":2},{"year":2024,"count":1},{"year":2025,"count":1},{"year":2026,"count":1}],"oa_status":"closed","license":"https://www.liebertpub.com/nv/resources-tools/text-and-data-mining-policy/121/","oa_locations":[{"url":"https://www.liebertpub.com/doi/full-xml/10.1089/dna.2020.6227","host_type":"publisher"},{"url":"https://www.liebertpub.com/doi/pdf/10.1089/dna.2020.6227","host_type":"publisher"},{"url":"https://doi.org/10.1089/dna.2020.6227","host_type":"journal"},{"url":"https://pubmed.ncbi.nlm.nih.gov/33600242","host_type":"repository"}],"fields_of_study":["Plant Molecular Biology Research","Plant Reproductive Biology","Plant nutrient uptake and metabolism","Brassica napus","Gene Expression Regulation, Plant","Genome-Wide Association Study","Multigene Family","Plant Proteins","Tetraploidy"],"mesh_terms":["Multigene Family","Plant Proteins","Gene Expression Regulation, Plant","Brassica napus","Genome-Wide Association Study","Tetraploidy"],"keywords":["Biology","Genetics","Gene","Gene family","Gene duplication","Genome","Segmental duplication","Exon","Tandem exon duplication","Subfunctionalization","Brassica napus","plant architecture","Wgcna","Lazy1","Igt Family"],"sdg_mappings":[{"sdg_number":0,"sdg_label":"Life in Land"}],"linked_datasets":[],"clinical_trials":[],"software_tools":[],"database_accessions":[],"source":"live","citation_network_status":"fetched"},"created_at":"2026-08-04T07:42:06.881007Z","pmid":null,"pmcid":null,"fwci":null,"citation_percentile":null,"influential_citations":0,"oa_status":null,"license":null,"views":0,"total_file_size_bytes":0,"version_count":0,"fair_f":null,"fair_a":null,"fair_i":null,"fair_r":null,"fair_zscore":null,"fair_rationale":null,"fair_model":null,"fair_agent_version":null,"fair_fulltext_source":null,"fair_has_llm":null,"fair_computed_at":null,"clinical_trials":[],"software_tools":[],"db_accessions":[],"linked_datasets":[],"topics":[]}