{"doi":"10.1088/1361-6560/adf9b9","title":"A dynamic reconstruction and motion estimation framework for cardiorespiratory motion-resolved real-time volumetric MR imaging (DREME-MR)","abstract":"OBJECTIVE: Based on a 3D pre-treatment magnetic resonance (MR) scan, we developed DREME-MR to jointly reconstruct the reference patient anatomy and solve a data-driven, patient-specific cardiorespiratory motion model. Via a motion encoder simultaneously learned during the reconstruction, DREME-MR further enables real-time volumetric MR imaging and cardiorespiratory motion tracking with minimal intra-treatment k-space data.&#xD;&#xD;Approach: DREME-MR integrates dynamic MRI reconstruction and real-time MR imaging into a unified, dual-task learning framework. From a 3D radial-spoke-based pre-treatment MR scan, DREME-MR uses spatiotemporal implicit-neural-representation (INR) to reconstruct pre-treatment dynamic volumetric MR images (learning task 1). The INR-based reconstruction takes a joint image reconstruction and deformable registration approach, yielding a reference anatomy and a corresponding cardiorespiratory motion model. The motion model adopts a low-rank, multi-resolution representation to approximate motion fields as products of motion coefficients and motion basis components (MBCs). Via a progressive, frequency-guided strategy, DREME-MR decouples cardiac MBCs from respiratory MBCs to resolve the two distinct motion modes. Simultaneously with the pre-treatment dynamic MRI reconstruction, DREME-MR also trains a multilayer perceptron (MLP)-based motion encoder to infer cardiorespiratory motion coefficients directly from the raw k-space data (learning task 2), allowing real-time, intra-treatment volumetric MR imaging and motion tracking with minimal k-space data (20-30 spokes) acquired after the pre-treatment MRI scan.&#xD;&#xD;Main results: Evaluated using data from a digital phantom (XCAT) and a human scan, DREME-MR solves real-time 3D cardiorespiratory motion with a latency of < 165 ms (= 150-ms data acquisition + 15-ms inference time), fulfilling the temporal constraint of real-time imaging. The XCAT study achieves mean(±S.D.) center-of-mass tracking errors of 0.73±0.38mm for a lung tumor and 1.69±1.12mm for the left ventricle. The human study shows good motion correlations (liver: 0.96; left ventricle: 0.65) between DREME-MR-solved motion and extracted surrogate signals.&#xD;&#xD;Significance: DREME-MR allows real-time 3D MRI and cardiorespiratory motion tracking with low latency, advancing intra-treatment MR-guided adaptive radiotherapy, including real-time multileaf collimator (MLC) tracking.","journal":"Physics in Medicine and Biology","year":2025,"id":540849,"datarank":0.16479184330021646,"base_score":1.0986122886681096,"endowment":1.0986122886681096,"self_citation_contribution":0.16479184330021646,"citation_network_contribution":0.0,"self_endowment_contribution":0.16479184330021646,"citer_contribution":0.0,"corpus_percentile":null,"corpus_rank":null,"citation_count":2,"citer_count":0,"citers_with_citation_signal":0,"citers_with_endowment":0,"datacite_reuse_total":0,"is_dataset":false,"is_dataset_confidence":0.9406,"is_data_producer":false,"deposit_databanks":null,"is_oa":true,"file_count":0,"downloads":0,"has_version_chain":false,"published_date":"2025-01-01","fair_score":null,"fair_percentile":null,"algorithm_id":"datarank_citation_only_1hop_v6","ranking_scope":"data_only","authors":[{"id":1289910,"name":"Xiaoxue Qian","orcid":"0000-0002-6185-1074","position":1,"is_corresponding":false},{"id":1428824,"name":"Guoping Xu","orcid":"0000-0001-8932-3321","position":2,"is_corresponding":false},{"id":356867,"name":"Can Wu","orcid":"0000-0003-1171-4546","position":3,"is_corresponding":false},{"id":783447,"name":"Ricardo Otazo","orcid":"0000-0002-3782-4930","position":4,"is_corresponding":false},{"id":1350384,"name":"Jie Deng","orcid":"0000-0002-2518-7989","position":5,"is_corresponding":false},{"id":473762,"name":"You Zhang","orcid":"0000-0002-8033-2755","position":6,"is_corresponding":false},{"id":881958,"name":"Hua‐Chieh Shao","orcid":"0009-0003-7664-7257","position":0,"is_corresponding":true}],"reference_count":82,"raw_metadata":{"citation_network_status":"fetched"},"created_at":"2026-07-19T02:52:42.901627Z","pmid":"40196152","pmcid":null,"fwci":null,"citation_percentile":null,"influential_citations":0,"oa_status":null,"license":null,"views":0,"total_file_size_bytes":0,"version_count":0,"fair_f":null,"fair_a":null,"fair_i":null,"fair_r":null,"fair_zscore":null,"fair_rationale":null,"fair_model":null,"fair_agent_version":null,"fair_fulltext_source":null,"fair_has_llm":null,"fair_computed_at":null,"clinical_trials":[],"software_tools":[],"db_accessions":[],"linked_datasets":[],"topics":[]}