{"doi":"10.1038/s41591-021-01552-x","title":"Reporting guidelines for human microbiome research: the STORMS checklist","abstract":"The particularly interdisciplinary nature of human microbiome research makes the organization and reporting of results spanning epidemiology, biology, bioinformatics, translational medicine and statistics a challenge. Commonly used reporting guidelines for observational or genetic epidemiology studies lack key features specific to microbiome studies. Therefore, a multidisciplinary group of microbiome epidemiology researchers adapted guidelines for observational and genetic studies to culture-independent human microbiome studies, and also developed new reporting elements for laboratory, bioinformatics and statistical analyses tailored to microbiome studies. The resulting tool, called 'Strengthening The Organization and Reporting of Microbiome Studies' (STORMS), is composed of a 17-item checklist organized into six sections that correspond to the typical sections of a scientific publication, presented as an editable table for inclusion in supplementary materials. The STORMS checklist provides guidance for concise and complete reporting of microbiome studies that will facilitate manuscript preparation, peer review, and reader comprehension of publications and comparative analysis of published results.","journal":"Nature Medicine","year":2021,"id":3477,"datarank":0.9180446128426427,"base_score":6.12029741895095,"endowment":6.12029741895095,"self_citation_contribution":0.9180446128426427,"citation_network_contribution":0.0,"self_endowment_contribution":0.9180446128426427,"citer_contribution":0.0,"corpus_percentile":null,"corpus_rank":null,"citation_count":454,"citer_count":0,"citers_with_citation_signal":0,"citers_with_endowment":0,"datacite_reuse_total":0,"is_dataset":false,"is_dataset_confidence":0.0417,"is_oa":true,"file_count":0,"downloads":0,"has_version_chain":false,"published_date":"2021-11-01","fair_score":null,"fair_percentile":null,"algorithm_id":"datarank_citation_only_1hop_v6","ranking_scope":"data_only","authors":[{"id":36302,"name":"Audrey Renson","orcid":"0000-0003-1603-2587","position":1,"is_corresponding":false},{"id":36303,"name":"Genomic Standards Consortium","orcid":null,"position":2,"is_corresponding":false},{"id":36305,"name":"Cesare Furlanello","orcid":"0000-0002-5384-3605","position":4,"is_corresponding":false},{"id":36307,"name":"Shaimaa Elsafoury","orcid":"0000-0002-0120-7746","position":7,"is_corresponding":false},{"id":11436,"name":"Ludwig Geistlinger","orcid":"0000-0002-2495-5464","position":8,"is_corresponding":false},{"id":36308,"name":"Lora J. Kasselman","orcid":"0000-0001-9581-0628","position":9,"is_corresponding":false},{"id":36309,"name":"Kelly Eckenrode","orcid":null,"position":10,"is_corresponding":false},{"id":36310,"name":"Janneke van de Wijgert","orcid":"0000-0003-2728-4560","position":11,"is_corresponding":false},{"id":36311,"name":"Amy Loughman","orcid":"0000-0002-0257-1443","position":12,"is_corresponding":false},{"id":36312,"name":"Francine Z. Marques","orcid":"0000-0003-4920-9991","position":13,"is_corresponding":false},{"id":36313,"name":"David A. MacIntyre","orcid":"0000-0002-4186-5567","position":14,"is_corresponding":false},{"id":19773,"name":"Manimozhiyan Arumugam","orcid":"0000-0002-0886-9101","position":15,"is_corresponding":false},{"id":36314,"name":"Rimsha Azhar","orcid":null,"position":16,"is_corresponding":false},{"id":36315,"name":"Francesco Beghini","orcid":"0000-0002-8105-9607","position":17,"is_corresponding":false},{"id":36316,"name":"Kirk Bergstrom","orcid":null,"position":18,"is_corresponding":false},{"id":36317,"name":"Ami Bhatt","orcid":null,"position":19,"is_corresponding":false},{"id":29049,"name":"J. Paul Brooks","orcid":"0000-0003-0423-8422","position":21,"is_corresponding":false},{"id":29050,"name":"Gregory A. Buck","orcid":"0000-0003-4621-3987","position":23,"is_corresponding":false},{"id":36320,"name":"Frederic Bushman","orcid":null,"position":24,"is_corresponding":false},{"id":36321,"name":"David Casero","orcid":"0000-0002-7347-3330","position":25,"is_corresponding":false},{"id":36322,"name":"Gerard Clarke","orcid":"0000-0001-9771-3979","position":26,"is_corresponding":false},{"id":36323,"name":"Maria Carmen Collado","orcid":null,"position":27,"is_corresponding":false},{"id":36324,"name":"Paul D. Cotter","orcid":"0000-0002-5465-9068","position":28,"is_corresponding":false},{"id":36325,"name":"John F. Cryan","orcid":"0000-0001-5887-2723","position":29,"is_corresponding":false},{"id":36326,"name":"Ryan T. Demmer","orcid":"0000-0003-3429-0379","position":30,"is_corresponding":false},{"id":36327,"name":"Suzanne Devkota","orcid":"0000-0001-5575-9362","position":31,"is_corresponding":false},{"id":36329,"name":"Juan S. Escobar","orcid":"0000-0001-7304-917X","position":33,"is_corresponding":false},{"id":25084,"name":"Sheila Fisher","orcid":"0000-0002-8681-2362","position":34,"is_corresponding":false},{"id":29081,"name":"Anthony A. Fodor","orcid":"0000-0002-9305-4264","position":36,"is_corresponding":false},{"id":29295,"name":"Ellen Todres","orcid":"0000-0001-9289-4432","position":38,"is_corresponding":false},{"id":19768,"name":"Jack A. Gilbert","orcid":"0000-0001-7920-7001","position":40,"is_corresponding":false},{"id":36333,"name":"Elizabeth Grice","orcid":null,"position":41,"is_corresponding":false},{"id":12342,"name":"Benjamin Haibe-Kains","orcid":null,"position":42,"is_corresponding":false},{"id":36335,"name":"Pamela Herd","orcid":"0000-0002-0137-5846","position":44,"is_corresponding":false},{"id":31864,"name":"Susan Holmes","orcid":"0000-0002-2208-8168","position":45,"is_corresponding":false},{"id":36336,"name":"Jonathan P. Jacobs","orcid":"0000-0003-4698-0254","position":46,"is_corresponding":false},{"id":29110,"name":"Nicholas B. King","orcid":"0000-0002-2093-3380","position":47,"is_corresponding":false},{"id":3554,"name":"Rob Knight","orcid":"0000-0002-0975-9019","position":48,"is_corresponding":false},{"id":19800,"name":"Dan Knights","orcid":"0000-0002-8205-2511","position":49,"is_corresponding":false},{"id":19801,"name":"Omry Koren","orcid":"0000-0002-7738-1337","position":50,"is_corresponding":false},{"id":36338,"name":"Douglas S. Kwon","orcid":"0000-0001-8521-8735","position":51,"is_corresponding":false},{"id":1089,"name":"Mark I. McCarthy","orcid":"0000-0002-4393-0510","position":52,"is_corresponding":false},{"id":1090,"name":"Dermot McGovern","orcid":"0000-0001-5621-759X","position":54,"is_corresponding":false},{"id":28485,"name":"Oliwia Makarewicz","orcid":"0000-0002-4404-1862","position":55,"is_corresponding":false},{"id":36342,"name":"Noel T. Mueller","orcid":"0000-0002-7412-8352","position":57,"is_corresponding":false},{"id":36343,"name":"Luigi Nezi","orcid":"0000-0002-4670-7656","position":58,"is_corresponding":false},{"id":36346,"name":"Edoardo Pasolli","orcid":"0000-0003-0799-3490","position":61,"is_corresponding":false},{"id":16741,"name":"Jeroen Raes","orcid":"0000-0002-1337-041X","position":62,"is_corresponding":false},{"id":36347,"name":"Matthew R. Redinbo","orcid":"0000-0003-0814-5346","position":63,"is_corresponding":false},{"id":36349,"name":"R. Balfour Sartor","orcid":"0000-0002-7820-632X","position":65,"is_corresponding":false},{"id":19831,"name":"Patrick D. Schloss","orcid":"0000-0002-6935-4275","position":66,"is_corresponding":false},{"id":24,"name":"Eran Segal","orcid":"0000-0002-6859-1164","position":68,"is_corresponding":false},{"id":36350,"name":"Michelle Shardell","orcid":"0000-0002-5283-2082","position":69,"is_corresponding":false},{"id":1118,"name":"Hilkka Soininen","orcid":"0000-0002-2785-9937","position":70,"is_corresponding":false},{"id":1119,"name":"Harry Sokol","orcid":"0000-0002-2914-1822","position":72,"is_corresponding":false},{"id":36353,"name":"Justin L. Sonnenburg","orcid":"0000-0003-2299-6817","position":73,"is_corresponding":false},{"id":36355,"name":"Louise B. Thingholm","orcid":"0000-0002-0266-4375","position":75,"is_corresponding":false},{"id":36356,"name":"Peter J. Turnbaugh","orcid":"0000-0002-0888-2875","position":76,"is_corresponding":false},{"id":36357,"name":"Vaibhav Upadhyay","orcid":"0000-0002-7652-1043","position":77,"is_corresponding":false},{"id":33231,"name":"Ramona L. Walls","orcid":"0000-0001-8815-0078","position":78,"is_corresponding":false},{"id":36358,"name":"Paul Wilmes","orcid":"0000-0002-6478-2924","position":79,"is_corresponding":false},{"id":36359,"name":"Takuji Yamada","orcid":"0000-0002-9622-1849","position":80,"is_corresponding":false},{"id":36360,"name":"Georg Zeller","orcid":"0000-0003-1429-7485","position":81,"is_corresponding":false},{"id":36361,"name":"Mingyu Zhang","orcid":"0000-0003-3628-0983","position":82,"is_corresponding":false},{"id":36362,"name":"Ni Zhao","orcid":"0000-0002-7762-3949","position":83,"is_corresponding":false},{"id":36364,"name":"Wenjun Bao","orcid":"0000-0001-8448-1689","position":85,"is_corresponding":false},{"id":12304,"name":"Tjeerd Dijkstra","orcid":null,"position":86,"is_corresponding":false},{"id":36366,"name":"Viswanath Devanarayan","orcid":"0000-0003-2059-9252","position":87,"is_corresponding":false},{"id":12305,"name":"Joaquin Dopazo","orcid":null,"position":88,"is_corresponding":false},{"id":23646,"name":"Xiaohui Fan","orcid":"0000-0003-3310-0131","position":89,"is_corresponding":false},{"id":36367,"name":"Matthias Fischer","orcid":"0000-0003-4728-8497","position":90,"is_corresponding":false},{"id":36369,"name":"Rebecca Kusko","orcid":"0000-0001-6730-5990","position":92,"is_corresponding":false},{"id":36370,"name":"Christopher E. Mason","orcid":"0000-0002-1850-1642","position":93,"is_corresponding":false},{"id":19875,"name":"Christopher M. Taylor","orcid":"0000-0002-7983-5275","position":94,"is_corresponding":false},{"id":36372,"name":"Andreas Scherer","orcid":"0000-0002-4254-7122","position":96,"is_corresponding":false},{"id":36374,"name":"Shraddha Thakkar","orcid":"0000-0002-2920-7713","position":98,"is_corresponding":false},{"id":17746,"name":"Weida Tong","orcid":"0000-0003-3488-6148","position":99,"is_corresponding":false},{"id":29160,"name":"Alyxandria M. Schubert","orcid":"0000-0003-4938-6007","position":102,"is_corresponding":false},{"id":493,"name":"Curtis Huttenhower","orcid":"0000-0002-1110-0096","position":103,"is_corresponding":false},{"id":36375,"name":"Jennifer B. Dowd","orcid":"0000-0003-2006-5656","position":104,"is_corresponding":false},{"id":36376,"name":"Heidi E. Jones","orcid":"0000-0002-4285-3752","position":105,"is_corresponding":false},{"id":489,"name":"Levi Waldron","orcid":"0000-0003-2725-0694","position":106,"is_corresponding":false},{"id":290,"name":"Susanna‐Assunta Sansone","orcid":"0000-0001-5306-5690","position":107,"is_corresponding":false},{"id":36377,"name":"Ami S. Bhatt","orcid":"0000-0001-8099-2975","position":108,"is_corresponding":false},{"id":18144,"name":"Héctor Corrada Bravo","orcid":"0000-0002-1255-4444","position":109,"is_corresponding":false},{"id":19779,"name":"Frederic D. Bushman","orcid":"0000-0003-4740-4056","position":110,"is_corresponding":false},{"id":36378,"name":"María Carmen Collado","orcid":"0000-0002-6204-4864","position":111,"is_corresponding":false},{"id":36379,"name":"Jennifer M. Fettweis","orcid":"0000-0001-5466-3000","position":112,"is_corresponding":false},{"id":36380,"name":"Sofia K. Forslund","orcid":"0000-0003-4285-6993","position":114,"is_corresponding":false},{"id":1151,"name":"André Franke","orcid":"0000-0003-1530-5811","position":115,"is_corresponding":false},{"id":36381,"name":"Elizabeth A. Grice","orcid":"0000-0003-3939-2200","position":116,"is_corresponding":false},{"id":12606,"name":"Benjamin Haibe‐Kains","orcid":"0000-0002-7684-0079","position":117,"is_corresponding":false},{"id":36382,"name":"Scott A. Handley","orcid":"0000-0002-2143-6570","position":118,"is_corresponding":false},{"id":36383,"name":"Morgan G. I. Langille","orcid":"0000-0002-6604-3009","position":119,"is_corresponding":false},{"id":36384,"name":"Shannon K. McWeeney","orcid":"0000-0001-8333-6607","position":120,"is_corresponding":false},{"id":36385,"name":"Matthew R. Olm","orcid":"0000-0001-5540-350X","position":121,"is_corresponding":false},{"id":36386,"name":"Noah W. Palm","orcid":"0000-0001-7262-9455","position":122,"is_corresponding":false},{"id":19861,"name":"Lynn M. Schriml","orcid":"0000-0001-8910-9851","position":123,"is_corresponding":false},{"id":29164,"name":"Thomas J. Sharpton","orcid":"0000-0002-5996-7764","position":124,"is_corresponding":false},{"id":31867,"name":"Aedín C. Culhane","orcid":"0000-0002-1395-9734","position":126,"is_corresponding":false},{"id":12590,"name":"Joaquı́n Dopazo","orcid":"0000-0003-3318-120X","position":127,"is_corresponding":false},{"id":15063,"name":"Christopher I. Hunter","orcid":"0000-0002-1335-0881","position":128,"is_corresponding":false},{"id":36301,"name":"Chloe Mirzayi","orcid":"0000-0002-9817-2868","position":0,"is_corresponding":true}],"reference_count":51,"raw_metadata":{"citation_network_status":"fetched"},"created_at":"2026-03-01T18:20:47.508186Z","pmid":null,"pmcid":null,"fwci":null,"citation_percentile":null,"influential_citations":0,"oa_status":null,"license":null,"views":0,"total_file_size_bytes":0,"version_count":0,"fair_f":null,"fair_a":null,"fair_i":null,"fair_r":null,"fair_zscore":null,"fair_rationale":null,"fair_model":null,"fair_agent_version":null,"fair_fulltext_source":null,"fair_has_llm":null,"fair_computed_at":null,"clinical_trials":[],"software_tools":[],"db_accessions":[],"linked_datasets":[],"topics":[]}