{"doi":"10.1038/nature13992","title":"A comparative encyclopedia of DNA elements in the mouse genome","abstract":"The laboratory mouse shares the majority of its protein-coding genes with humans, making it the premier model organism in biomedical research, yet the two mammals differ in significant ways. To gain greater insights into both shared and species-specific transcriptional and cellular regulatory programs in the mouse, the Mouse ENCODE Consortium has mapped transcription, DNase I hypersensitivity, transcription factor binding, chromatin modifications and replication domains throughout the mouse genome in diverse cell and tissue types. By comparing with the human genome, we not only confirm substantial conservation in the newly annotated potential functional sequences, but also find a large degree of divergence of sequences involved in transcriptional regulation, chromatin state and higher order chromatin organization. Our results illuminate the wide range of evolutionary forces acting on genes and their regulatory regions, and provide a general resource for research into mammalian biology and mechanisms of human diseases.","journal":"Nature","year":2014,"id":11206,"datarank":11.601563630221706,"base_score":7.517520850603031,"endowment":7.517520850603031,"self_citation_contribution":1.1276281275904547,"citation_network_contribution":10.473935502631251,"self_endowment_contribution":1.1276281275904547,"citer_contribution":10.473935502631251,"corpus_percentile":81.93653376729048,"corpus_rank":223,"citation_count":1909,"citer_count":160,"citers_with_citation_signal":160,"citers_with_endowment":160,"datacite_reuse_total":0,"is_dataset":true,"is_dataset_confidence":0.9259,"is_oa":true,"file_count":0,"downloads":0,"has_version_chain":false,"published_date":"2014-11-19","fair_score":41.4583,"fair_percentile":20.734388742304308,"algorithm_id":"datarank_citation_only_1hop_v6","ranking_scope":"data_only","authors":[{"id":36425,"name":"Yong Cheng","orcid":"0000-0002-9314-0971","position":1,"is_corresponding":false},{"id":42933,"name":"Alessandra Breschi","orcid":null,"position":2,"is_corresponding":false},{"id":43189,"name":"Jost Vielmetter","orcid":"0000-0002-4314-7163","position":3,"is_corresponding":false},{"id":90362,"name":"Weisheng Wu","orcid":null,"position":4,"is_corresponding":false},{"id":90363,"name":"Tyrone Ryba","orcid":"0009-0001-0216-897X","position":5,"is_corresponding":false},{"id":4950,"name":"Richard Sandstrom","orcid":"0000-0002-3356-1547","position":6,"is_corresponding":false},{"id":90364,"name":"Zhihai Ma","orcid":null,"position":7,"is_corresponding":false},{"id":45052,"name":"Qi Dai","orcid":"0000-0002-2082-0693","position":8,"is_corresponding":false},{"id":90365,"name":"Benjamin D. Pope","orcid":"0000-0003-1847-9163","position":9,"is_corresponding":false},{"id":29911,"name":"Yin Shen","orcid":"0000-0001-9901-5613","position":10,"is_corresponding":false},{"id":17862,"name":"Dmitri D. Pervouchine","orcid":"0000-0003-0543-9760","position":11,"is_corresponding":false},{"id":361,"name":"Sarah Djebali","orcid":"0000-0002-0599-1267","position":12,"is_corresponding":false},{"id":11622,"name":"Robert E. Thurman","orcid":null,"position":13,"is_corresponding":false},{"id":19898,"name":"Stephen C.J. Parker","orcid":"0000-0001-8122-0117","position":14,"is_corresponding":false},{"id":11623,"name":"Eric Rynes","orcid":"0000-0003-0620-631X","position":15,"is_corresponding":false},{"id":43048,"name":"Anthony Kirilusha","orcid":null,"position":16,"is_corresponding":false},{"id":11727,"name":"Georgi K. Marinov","orcid":"0000-0003-1822-7273","position":17,"is_corresponding":false},{"id":11729,"name":"Brian A. Williams","orcid":"0000-0003-3253-611X","position":18,"is_corresponding":false},{"id":11778,"name":"Diane Trout","orcid":"0000-0002-4928-5532","position":19,"is_corresponding":false},{"id":42911,"name":"Henry Amrhein","orcid":null,"position":20,"is_corresponding":false},{"id":42976,"name":"Katherine Fisher-Aylor","orcid":"0000-0003-3371-2947","position":21,"is_corresponding":false},{"id":1761,"name":"Kristin G. Ardlie","orcid":"0000-0003-4272-6283","position":22,"is_corresponding":false},{"id":42960,"name":"Gilberto DeSalvo","orcid":null,"position":23,"is_corresponding":false},{"id":11772,"name":"Lei-Hoon See","orcid":null,"position":24,"is_corresponding":false},{"id":11749,"name":"Meagan Fastuca","orcid":null,"position":25,"is_corresponding":false},{"id":42963,"name":"Sarah Donaldson","orcid":"0000-0002-2576-3173","position":26,"is_corresponding":false},{"id":11730,"name":"Chris Zaleski","orcid":null,"position":27,"is_corresponding":false},{"id":90366,"name":"Pablo Prieto","orcid":"0000-0002-1615-3998","position":29,"is_corresponding":false},{"id":11723,"name":"Julien Lagarde","orcid":"0000-0002-0290-7445","position":30,"is_corresponding":false},{"id":44597,"name":"Giovanni Bussotti","orcid":"0000-0002-4078-7413","position":31,"is_corresponding":false},{"id":11722,"name":"Andrea Tanzer","orcid":"0000-0003-2873-4236","position":32,"is_corresponding":false},{"id":90367,"name":"Olgert Denas","orcid":null,"position":33,"is_corresponding":false},{"id":90368,"name":"Kanwei Li","orcid":null,"position":34,"is_corresponding":false},{"id":42923,"name":"M. A. Bender","orcid":null,"position":35,"is_corresponding":false},{"id":90369,"name":"Miaohua Zhang","orcid":"0000-0002-5281-7851","position":36,"is_corresponding":false},{"id":42938,"name":"Rachel Byron","orcid":null,"position":37,"is_corresponding":false},{"id":43001,"name":"Mark T. Groudine","orcid":null,"position":38,"is_corresponding":false},{"id":90370,"name":"David McCleary","orcid":null,"position":39,"is_corresponding":false},{"id":90371,"name":"Long Pham","orcid":"0000-0003-4117-8860","position":40,"is_corresponding":false},{"id":3790,"name":"Zhen Ye","orcid":"0000-0002-0687-8901","position":41,"is_corresponding":false},{"id":43051,"name":"Samantha Kuan","orcid":"0000-0002-8071-9079","position":42,"is_corresponding":false},{"id":3792,"name":"Lee Edsall","orcid":"0000-0002-0326-2829","position":43,"is_corresponding":false},{"id":829,"name":"Yi-Chieh Wu","orcid":"0000-0002-9787-5430","position":44,"is_corresponding":false},{"id":41930,"name":"Albert J. Vilella","orcid":"0000-0002-2005-2516","position":45,"is_corresponding":false},{"id":830,"name":"Mukul S. Bansal","orcid":"0000-0003-0039-2596","position":46,"is_corresponding":false},{"id":14693,"name":"Sharon L. R. Kardia","orcid":"0000-0002-9853-3379","position":47,"is_corresponding":false},{"id":43045,"name":"Cheryl A. Keller","orcid":"0000-0001-6594-0245","position":48,"is_corresponding":false},{"id":90372,"name":"Christapher S. Morrissey","orcid":"0000-0003-0239-4579","position":49,"is_corresponding":false},{"id":17262,"name":"Tejaswini Mishra","orcid":"0000-0001-9931-1260","position":50,"is_corresponding":false},{"id":24775,"name":"Deepti Jain","orcid":"0000-0001-5629-2522","position":51,"is_corresponding":false},{"id":90373,"name":"Nergiz Dogan","orcid":null,"position":52,"is_corresponding":false},{"id":19563,"name":"Robert S. Harris","orcid":"0000-0001-5464-6892","position":53,"is_corresponding":false},{"id":62228,"name":"Philip Cayting","orcid":null,"position":54,"is_corresponding":false},{"id":43041,"name":"Trupti Kawli","orcid":null,"position":55,"is_corresponding":false},{"id":42931,"name":"Beatrice Borsari","orcid":"0000-0003-4357-3557","position":56,"is_corresponding":false},{"id":20012,"name":"Ghia Euskirchen","orcid":null,"position":57,"is_corresponding":false},{"id":360,"name":"Anshul Kundaje","orcid":"0000-0003-3084-2287","position":58,"is_corresponding":false},{"id":29389,"name":"Shin Lin","orcid":"0000-0003-0118-0413","position":59,"is_corresponding":false},{"id":11486,"name":"Dianbo Liu","orcid":"0000-0002-3042-9161","position":60,"is_corresponding":false},{"id":43035,"name":"Camden Jansen","orcid":"0000-0001-9041-4693","position":61,"is_corresponding":false},{"id":22174,"name":"Venkat S. Malladi","orcid":"0000-0002-0144-0564","position":62,"is_corresponding":false},{"id":90374,"name":"Melissa S. Cline","orcid":null,"position":63,"is_corresponding":false},{"id":90375,"name":"Drew T. Erickson","orcid":null,"position":64,"is_corresponding":false},{"id":90376,"name":"Vanessa M. Kirkup","orcid":null,"position":65,"is_corresponding":false},{"id":90377,"name":"Katrina Learned","orcid":"0000-0003-3112-7525","position":66,"is_corresponding":false},{"id":43164,"name":"Cricket A. Sloan","orcid":"0000-0002-0693-6999","position":67,"is_corresponding":false},{"id":19975,"name":"Kate R. Rosenbloom","orcid":"0000-0001-8799-4826","position":68,"is_corresponding":false},{"id":90378,"name":"Beatriz Lacerda de Sousa","orcid":null,"position":69,"is_corresponding":false},{"id":19041,"name":"Kathryn Beal","orcid":"0000-0001-5271-8733","position":70,"is_corresponding":false},{"id":90379,"name":"Miguel Pignatelli","orcid":"0000-0002-1800-4849","position":71,"is_corresponding":false},{"id":20075,"name":"David B. Jaffe","orcid":"0000-0001-8739-568X","position":72,"is_corresponding":false},{"id":19945,"name":"Zheng Lian","orcid":"0000-0002-1672-3364","position":73,"is_corresponding":false},{"id":90380,"name":"Dongwon Lee","orcid":"0000-0002-1568-2249","position":75,"is_corresponding":false},{"id":41926,"name":"Melissa J. Hubisz","orcid":"0000-0002-9561-6830","position":76,"is_corresponding":false},{"id":90381,"name":"Miguel Ramalho Santos","orcid":null,"position":77,"is_corresponding":false},{"id":832,"name":"Javier Herrero","orcid":"0000-0001-7313-717X","position":78,"is_corresponding":false},{"id":11760,"name":"Todd A. Johnson","orcid":"0000-0003-4607-2782","position":80,"is_corresponding":false},{"id":11661,"name":"Shinny Vong","orcid":null,"position":81,"is_corresponding":false},{"id":4953,"name":"Kristen Lee","orcid":"0000-0002-6837-9569","position":82,"is_corresponding":false},{"id":11634,"name":"Daniel Bates","orcid":null,"position":83,"is_corresponding":false},{"id":11650,"name":"Fidencio Neri","orcid":null,"position":84,"is_corresponding":false},{"id":11637,"name":"Morgan Diegel","orcid":null,"position":85,"is_corresponding":false},{"id":14106,"name":"Angela Tam","orcid":"0000-0001-8322-180X","position":86,"is_corresponding":false},{"id":11676,"name":"Peter J. Sabo","orcid":"0000-0003-2290-1718","position":87,"is_corresponding":false},{"id":90382,"name":"Matthew S. Wilken","orcid":null,"position":88,"is_corresponding":false},{"id":90383,"name":"Thomas A. Reh","orcid":"0000-0002-3524-0886","position":89,"is_corresponding":false},{"id":11641,"name":"Erika Giste","orcid":null,"position":90,"is_corresponding":false},{"id":2917,"name":"Manu Setty","orcid":"0000-0002-0344-2627","position":91,"is_corresponding":false},{"id":11644,"name":"Tanya Kutyavin","orcid":null,"position":92,"is_corresponding":false},{"id":11627,"name":"Eric Haugen","orcid":"0000-0001-7444-8981","position":93,"is_corresponding":false},{"id":11638,"name":"Douglas Dunn","orcid":null,"position":94,"is_corresponding":false},{"id":11653,"name":"Alex P. Reynolds","orcid":null,"position":95,"is_corresponding":false},{"id":19875,"name":"Christopher M. Taylor","orcid":"0000-0002-7983-5275","position":96,"is_corresponding":false},{"id":11624,"name":"Richard Humbert","orcid":null,"position":97,"is_corresponding":false},{"id":43040,"name":"Momoe Kato","orcid":"0000-0002-1161-5233","position":98,"is_corresponding":false},{"id":18006,"name":"Marella de Bruijn","orcid":"0000-0002-4934-4125","position":99,"is_corresponding":false},{"id":90384,"name":"Licia Selleri","orcid":"0000-0002-6817-1469","position":100,"is_corresponding":false},{"id":90385,"name":"Alexander Rudensky","orcid":null,"position":101,"is_corresponding":false},{"id":90386,"name":"Steven Josefowicz","orcid":null,"position":102,"is_corresponding":false},{"id":13003,"name":"Robert Samstein","orcid":"0000-0001-6860-2401","position":103,"is_corresponding":false},{"id":2125,"name":"Evan E. Eichler","orcid":"0000-0002-8246-4014","position":104,"is_corresponding":false},{"id":42118,"name":"Stuart H. Orkin","orcid":"0000-0002-0313-152X","position":105,"is_corresponding":false},{"id":90387,"name":"Dana Levasseur","orcid":null,"position":106,"is_corresponding":false},{"id":90388,"name":"Thalia Papayannopoulou","orcid":"0000-0002-4523-1393","position":107,"is_corresponding":false},{"id":90389,"name":"Kai-Hsin Chang","orcid":null,"position":108,"is_corresponding":false},{"id":90390,"name":"Arthur Skoultchi","orcid":null,"position":109,"is_corresponding":false},{"id":90391,"name":"Srikanta Gosh","orcid":null,"position":110,"is_corresponding":false},{"id":90392,"name":"Christine Disteche","orcid":null,"position":111,"is_corresponding":false},{"id":90393,"name":"Piper Treuting","orcid":null,"position":112,"is_corresponding":false},{"id":43196,"name":"Yanli Wang","orcid":"0000-0001-7438-5001","position":113,"is_corresponding":false},{"id":90394,"name":"Mitchell J. Weiss","orcid":"0000-0003-2460-3036","position":114,"is_corresponding":false},{"id":90395,"name":"Gerd A. Blobel","orcid":"0000-0002-0714-9612","position":115,"is_corresponding":false},{"id":90396,"name":"Xiaoyi Cao","orcid":"0000-0001-7222-5450","position":116,"is_corresponding":false},{"id":90397,"name":"Sheng Zhong","orcid":"0000-0001-6419-7453","position":117,"is_corresponding":false},{"id":24564,"name":"Ting Wang","orcid":"0000-0002-6800-242X","position":118,"is_corresponding":false},{"id":45071,"name":"Elise Feingold","orcid":null,"position":119,"is_corresponding":false},{"id":81146,"name":"Ashwinikumar Kulkarni","orcid":"0000-0003-0951-2427","position":120,"is_corresponding":false},{"id":90398,"name":"Leslie B. Adams","orcid":"0000-0003-4956-271X","position":121,"is_corresponding":false},{"id":43236,"name":"Xiao-Qiao Zhou","orcid":null,"position":122,"is_corresponding":false},{"id":23397,"name":"Michael J. Pazin","orcid":"0000-0002-7561-3640","position":123,"is_corresponding":false},{"id":19962,"name":"Elise A. Feingold","orcid":null,"position":124,"is_corresponding":false},{"id":19436,"name":"James Taylor","orcid":"0000-0001-5079-840X","position":126,"is_corresponding":false},{"id":11794,"name":"Ali Mortazavi","orcid":"0000-0002-4259-6362","position":127,"is_corresponding":false},{"id":43200,"name":"Hendrik Weisser","orcid":"0000-0001-9723-7503","position":128,"is_corresponding":false},{"id":11680,"name":"John A. Stamatoyannopoulos","orcid":null,"position":129,"is_corresponding":false},{"id":43166,"name":"Valentina Snetkova","orcid":"0000-0003-3575-3240","position":130,"is_corresponding":false},{"id":364,"name":"Thomas R Gingeras","orcid":null,"position":132,"is_corresponding":false},{"id":42992,"name":"David M. Gilbert","orcid":"0000-0001-8087-9737","position":133,"is_corresponding":false},{"id":19594,"name":"Ross C. Hardison","orcid":"0000-0003-4084-7516","position":134,"is_corresponding":false},{"id":18712,"name":"Michael A. Beer","orcid":"0000-0001-9955-3809","position":135,"is_corresponding":false},{"id":29403,"name":"Simona Volpi","orcid":"0000-0002-0353-2235","position":136,"is_corresponding":false},{"id":90399,"name":"The Mouse ENCODE Consortium","orcid":null,"position":137,"is_corresponding":false},{"id":90400,"name":"Wei-Sheng Wu","orcid":"0000-0002-9919-9579","position":138,"is_corresponding":false},{"id":11799,"name":"Jörg Drenkow","orcid":null,"position":139,"is_corresponding":false},{"id":11793,"name":"Alexander Dobin","orcid":"0000-0002-4115-9128","position":140,"is_corresponding":false},{"id":43253,"name":"Mark Groudine","orcid":"0000-0002-1116-2588","position":141,"is_corresponding":false},{"id":90401,"name":"Nergiz Doğan","orcid":"0000-0002-5922-4194","position":142,"is_corresponding":false},{"id":90402,"name":"Melissa Cline","orcid":"0000-0002-0148-1956","position":143,"is_corresponding":false},{"id":19946,"name":"Lian Jin","orcid":"0000-0003-4886-6391","position":144,"is_corresponding":false},{"id":44609,"name":"Cédric Notredame","orcid":"0000-0003-1461-0988","position":145,"is_corresponding":false},{"id":11636,"name":"Theresa K. Canfield","orcid":null,"position":146,"is_corresponding":false},{"id":43140,"name":"Alex Reynolds","orcid":"0000-0003-0382-4921","position":147,"is_corresponding":false},{"id":90403,"name":"Alexander Y. Rudensky","orcid":"0000-0003-1280-2898","position":148,"is_corresponding":false},{"id":90404,"name":"Steven Z. Josefowicz","orcid":"0000-0001-7453-779X","position":149,"is_corresponding":false},{"id":90405,"name":"Dana N. Levasseur","orcid":null,"position":150,"is_corresponding":false},{"id":90406,"name":"Kai‐Hsin Chang","orcid":null,"position":151,"is_corresponding":false},{"id":90407,"name":"Arthur I. Skoultchi","orcid":"0000-0001-5096-8077","position":152,"is_corresponding":false},{"id":90408,"name":"Christine M. Distèche","orcid":"0000-0002-5433-495X","position":153,"is_corresponding":false},{"id":90409,"name":"Piper M. Treuting","orcid":"0000-0002-1812-1519","position":154,"is_corresponding":false},{"id":43293,"name":"Xiaoqiao Zhou","orcid":"0000-0002-0724-5153","position":155,"is_corresponding":false},{"id":11810,"name":"Barbara Wold","orcid":"0000-0003-3235-8130","position":156,"is_corresponding":false},{"id":18775,"name":"J Stamatoyannopoulos","orcid":"0000-0002-2664-5769","position":158,"is_corresponding":false},{"id":59323,"name":"Simon G. Gregory","orcid":"0000-0002-7805-1743","position":160,"is_corresponding":false},{"id":11811,"name":"T Gingeras","orcid":"0000-0001-9106-3573","position":161,"is_corresponding":false},{"id":43220,"name":"Feng Yue","orcid":"0000-0002-7954-5462","position":0,"is_corresponding":true}],"reference_count":73,"raw_metadata":{"citation_network_status":"fetched"},"created_at":"2026-03-01T18:20:47.508186Z","pmid":"25409824","pmcid":"PMC4266106","fwci":null,"citation_percentile":null,"influential_citations":0,"oa_status":"hybrid","license":"cc-by-nc-sa","views":0,"total_file_size_bytes":0,"version_count":0,"fair_f":52.5,"fair_a":55.0,"fair_i":25.0,"fair_r":33.3333,"fair_zscore":-0.3395,"fair_rationale":{"fair_score":41.46,"has_llm":true,"dimensions":{"F":{"name":"Findable","score":52.5,"criteria":[{"key":"f_has_doi","label":"Has a persistent DOI","kind":"deterministic","weight":1.0,"fraction":1.0,"signal":"DOI present","rationale":null},{"key":"f_repository_presence","label":"Indexed in repositories / literature DBs","kind":"deterministic","weight":1.0,"fraction":1.0,"signal":"datacite=0, pmcid=True, pmid=True","rationale":null},{"key":"f_persistent_ids","label":"Resolvable scholarly identifiers (OpenAlex)","kind":"deterministic","weight":0.5,"fraction":0.0,"signal":"no OpenAlex id","rationale":null},{"key":"f_metadata_richness","label":"Rich, machine-readable metadata","kind":"llm","weight":1.0,"fraction":0.25,"signal":null,"rationale":"The paper provides rich descriptive metadata in the text and supplementary tables, but the text alone does not describe machine-readable metadata formats (e.g., JSON-LD, RDF) or structured metadata schemas for automated discovery."}]},"A":{"name":"Accessible","score":55.0,"criteria":[{"key":"a_open_access","label":"Open Access / files deposited","kind":"deterministic","weight":1.5,"fraction":1.0,"signal":"Open Access","rationale":null},{"key":"a_retrievable","label":"Free full text retrievable","kind":"deterministic","weight":1.0,"fraction":0.0,"signal":"0 OA location(s)","rationale":null},{"key":"a_access_protocol","label":"Clear data/code access protocol","kind":"llm","weight":1.0,"fraction":0.5,"signal":null,"rationale":"The paper mentions data availability at http://mouseencode.org and references supplementary tables, but does not specify clear access protocols, licensing terms, or authentication requirements for the public datasets, though the URL provides a direct access point."}]},"I":{"name":"Interoperable","score":25.0,"criteria":[{"key":"i_linked_data","label":"Linked datasets / DataCite relations","kind":"deterministic","weight":1.0,"fraction":0.0,"signal":"linked_datasets=0, datacite=0","rationale":null},{"key":"i_standard_ids","label":"References data via standard accessions","kind":"deterministic","weight":1.0,"fraction":0.0,"signal":"accessions=0, trials=0","rationale":null},{"key":"i_standards","label":"Standard formats, vocabularies & identifiers","kind":"llm","weight":1.0,"fraction":0.5,"signal":null,"rationale":"The paper uses standard genomic formats (e.g., BAM, bigWig implied) and community vocabularies (e.g., gene symbols, GO terms), but does not explicitly state adherence to formal ontologies or identifier standards for all data types."}]},"R":{"name":"Reusable","score":33.33,"criteria":[{"key":"r_license","label":"Clear, open reuse license","kind":"deterministic","weight":1.5,"fraction":0.0,"signal":"no license","rationale":null},{"key":"r_downloads","label":"Demonstrated reuse (downloads)","kind":"deterministic","weight":0.5,"fraction":0.0,"signal":"downloads=0","rationale":null},{"key":"r_version","label":"Versioned / maintained","kind":"deterministic","weight":0.5,"fraction":0.0,"signal":"no version chain","rationale":null},{"key":"r_dataset","label":"Classified as a data resource","kind":"deterministic","weight":0.5,"fraction":1.0,"signal":"is_dataset","rationale":null},{"key":"r_reusability","label":"Data-availability statement, license & reproducibility","kind":"llm","weight":2.0,"fraction":0.5,"signal":null,"rationale":"The paper includes a data-availability statement (website and supplementary tables), uses Creative Commons license (CC BY-NC-SA 3.0), and provides extensive methodological details, but lacks explicit code availability and versioned data releases to ensure full reproducibility."}]}},"suggestions":["Deposit all raw and processed data in a FAIR-aligned repository (e.g., GEO, ArrayExpress) with persistent identifiers (e.g., DOIs) for each dataset.","Provide explicit licensing for each dataset beyond the article license, including terms for commercial use and attribution.","Include a formal data descriptor or metadata record using structured machine-readable formats (e.g., ISA-Tab, JSON-LD) to enhance findability.","Make analysis code and workflows publicly available in a version-controlled repository (e.g., GitHub) with clear documentation and a license.","Specify authentication and access protocols (e.g., login, API keys) if any data require controlled access, or state open access clearly."],"model":"deepseek/deepseek-v4-flash","agent_version":"fair_agent_v2","fulltext_source":"unpaywall_pdf"},"fair_model":"deepseek/deepseek-v4-flash","fair_agent_version":"fair_agent_v2","fair_fulltext_source":"unpaywall_pdf","fair_has_llm":true,"fair_computed_at":"2026-06-18T00:30:43.377790Z","clinical_trials":[],"software_tools":[],"db_accessions":[],"linked_datasets":[],"topics":[]}