{"doi":"10.1021/acs.jcim.9b00683","title":"ROBOKOP KG and KGB: Integrated Knowledge Graphs from Federated Sources","abstract":null,"journal":"Journal of Chemical Information and Modeling","year":2019,"id":598996,"datarank":0.6284482113039639,"base_score":4.189654742026425,"endowment":4.189654742026425,"self_citation_contribution":0.6284482113039639,"citation_network_contribution":0.0,"self_endowment_contribution":0.6284482113039639,"citer_contribution":0.0,"corpus_percentile":null,"corpus_rank":null,"citation_count":65,"citer_count":0,"citers_with_citation_signal":0,"citers_with_endowment":0,"datacite_reuse_total":0,"is_dataset":false,"is_dataset_confidence":null,"is_data_producer":false,"deposit_databanks":null,"is_oa":false,"file_count":0,"downloads":0,"has_version_chain":false,"published_date":null,"fair_score":null,"fair_percentile":null,"algorithm_id":"datarank_citation_only_1hop_v6","ranking_scope":"data_only","authors":[{"id":1535220,"name":"Steven Cox","orcid":"0000-0001-7346-447X","position":1,"is_corresponding":false},{"id":1535221,"name":"James Balhoff","orcid":null,"position":2,"is_corresponding":false},{"id":398294,"name":"Yaphet Kebede","orcid":"0000-0002-5046-0246","position":3,"is_corresponding":false},{"id":416536,"name":"Patrick Wang","orcid":"0000-0002-6693-6106","position":4,"is_corresponding":false},{"id":1535222,"name":"Kenneth Morton","orcid":null,"position":5,"is_corresponding":false},{"id":6463,"name":"Karamarie Fecho","orcid":"0000-0002-6704-9306","position":6,"is_corresponding":false},{"id":108077,"name":"Alexander Tropsha","orcid":"0000-0003-3802-8896","position":7,"is_corresponding":false},{"id":6475,"name":"Chris Bizon","orcid":"0000-0002-9491-7674","position":0,"is_corresponding":false}],"reference_count":0,"raw_metadata":{"has_enrichment":true,"resolved":true,"title":"ROBOKOP KG and KGB: Integrated Knowledge Graphs from Federated Sources","abstract":"A proliferation of data sources has led to the notional existence of an implicit Knowledge Graph (KG) that contains vast amounts of biological knowledge contributed by distributed Application Programming Interfaces (APIs). However, challenges arise when integrating data across multiple APIs due to incompatible semantic types, identifier schemes, and data formats. We present ROBOKOP KG (http://robokopkg.renci.org), which is a KG that was initially built to support the open biomedical question-answering application, ROBOKOP (Reasoning Over Biomedical Objects linked in Knowledge-Oriented Pathways) (http://robokop.renci.org). Additionally, we present the ROBOKOP Knowledge Graph Builder (KGB), which constructs the KG and provides an extensible framework to handle graph query over and integration of federated data sources.","is_dataset_classified":null,"base_score":4.189654742026425,"endowment":4.189654742026425,"datacite_reuse_total":0,"file_count":0,"downloads":0,"views":0,"has_version_chain":false,"is_dataset":false,"is_oa":false,"pmid":"31769676","pmcid":"PMC11646564","openalex_id":"https://openalex.org/W2990374909","authors":[],"funders":[{"funder_name":"National Center for Advancing Translational Sciences","grant_id":"OT2TR002514","title":null}],"total_grants":1,"fwci":4.0249,"citation_percentile":0.94141494,"influential_citations":0,"citation_trend":[{"year":2020,"count":9},{"year":2021,"count":10},{"year":2022,"count":6},{"year":2023,"count":9},{"year":2024,"count":10},{"year":2025,"count":16},{"year":2026,"count":5}],"oa_status":"green","license":"https://doi.org/10.15223/policy-029","oa_locations":[{"url":"https://www.ncbi.nlm.nih.gov/pmc/articles/11646564","host_type":"repository"},{"url":"https://www.ncbi.nlm.nih.gov/pmc/articles/11646564","host_type":"repository"},{"url":"https://pubs.acs.org/doi/pdf/10.1021/acs.jcim.9b00683","host_type":"publisher"},{"url":"https://doi.org/10.1021/acs.jcim.9b00683","host_type":"journal"},{"url":"https://pubmed.ncbi.nlm.nih.gov/31769676","host_type":"repository"}],"fields_of_study":["Genomics and Rare Diseases","Biomedical Text Mining and Ontologies","Bioinformatics and Genomic Networks"],"mesh_terms":["Computer Graphics","User-Computer Interface","Databases, Factual","Knowledge Bases","Data Mining"],"keywords":["Computer science","Identifier","Notional amount","Knowledge graph","Graph","Programming language","Information retrieval","Theoretical computer science","World Wide Web"],"sdg_mappings":[],"linked_datasets":[],"clinical_trials":[],"software_tools":[],"database_accessions":[],"source":"live","citation_network_status":"fetched"},"created_at":"2026-07-28T16:37:33.218714Z","pmid":null,"pmcid":null,"fwci":null,"citation_percentile":null,"influential_citations":0,"oa_status":null,"license":null,"views":0,"total_file_size_bytes":0,"version_count":0,"fair_f":null,"fair_a":null,"fair_i":null,"fair_r":null,"fair_zscore":null,"fair_rationale":null,"fair_model":null,"fair_agent_version":null,"fair_fulltext_source":null,"fair_has_llm":null,"fair_computed_at":null,"clinical_trials":[],"software_tools":[],"db_accessions":[],"linked_datasets":[],"topics":[]}