{"doi":"10.1016/j.cell.2020.04.015","title":"A Paleogenomic Reconstruction of the Deep Population History of the Andes","abstract":"There are many unanswered questions about the population history of the Central and South Central Andes, particularly regarding the impact of large-scale societies, such as the Moche, Wari, Tiwanaku, and Inca. We assembled genome-wide data on 89 individuals dating from ∼9,000-500 years ago (BP), with a particular focus on the period of the rise and fall of state societies. Today's genetic structure began to develop by 5,800 BP, followed by bi-directional gene flow between the North and South Highlands, and between the Highlands and Coast. We detect minimal admixture among neighboring groups between ∼2,000-500 BP, although we do detect cosmopolitanism (people of diverse ancestries living side-by-side) in the heartlands of the Tiwanaku and Inca polities. We also highlight cases of long-range mobility connecting the Andes to Argentina and the Northwest Andes to the Amazon Basin. VIDEO ABSTRACT.","journal":"Cell","year":2020,"id":50465,"datarank":2.2752328634500016,"base_score":5.262690188904886,"endowment":5.262690188904886,"self_citation_contribution":0.7894035283357329,"citation_network_contribution":1.4858293351142688,"self_endowment_contribution":0.7894035283357329,"citer_contribution":1.4858293351142688,"corpus_percentile":90.5855960392976,"corpus_rank":1218,"citation_count":192,"citer_count":100,"citers_with_citation_signal":87,"citers_with_endowment":87,"datacite_reuse_total":0,"is_dataset":true,"is_dataset_confidence":0.8731,"is_data_producer":false,"deposit_databanks":null,"is_oa":true,"file_count":0,"downloads":0,"has_version_chain":false,"published_date":"2020-01-01","fair_score":58.3333,"fair_percentile":72.8829104249465,"algorithm_id":"datarank_citation_only_1hop_v6","ranking_scope":"data_only","authors":[{"id":69375,"name":"Iosif Lazaridis","orcid":"0000-0002-4094-9347","position":1,"is_corresponding":false},{"id":247941,"name":"Chiara Barbieri","orcid":"0000-0001-8827-5655","position":2,"is_corresponding":false},{"id":7261,"name":"Pontus Skoglund","orcid":"0000-0002-3021-5913","position":3,"is_corresponding":false},{"id":247942,"name":"Nadin Rohland","orcid":"0000-0002-8112-9601","position":4,"is_corresponding":false},{"id":708,"name":"Swapan Mallick","orcid":"0000-0002-4531-4439","position":5,"is_corresponding":false},{"id":247943,"name":"Cosimo Posth","orcid":"0000-0002-8206-3907","position":6,"is_corresponding":false},{"id":248929,"name":"Kelly Harkins-Kinkaid","orcid":null,"position":7,"is_corresponding":false},{"id":247944,"name":"Matthew Ferry","orcid":"0000-0001-7319-0085","position":8,"is_corresponding":false},{"id":247945,"name":"Éadaoin Harney","orcid":"0000-0001-9385-7297","position":9,"is_corresponding":false},{"id":247946,"name":"Megan Michel","orcid":"0000-0002-5484-7974","position":10,"is_corresponding":false},{"id":248930,"name":"Kristin Stewardson","orcid":null,"position":11,"is_corresponding":false},{"id":247947,"name":"Jannine Forst","orcid":"0000-0002-3309-3165","position":12,"is_corresponding":false},{"id":247948,"name":"José M. Capriles","orcid":"0000-0001-6046-0939","position":13,"is_corresponding":false},{"id":248931,"name":"Marta Alfonso Durruty","orcid":null,"position":14,"is_corresponding":false},{"id":248932,"name":"Karina Aranda Álvarez","orcid":null,"position":15,"is_corresponding":false},{"id":247949,"name":"David Beresford‐Jones","orcid":"0000-0003-2427-7007","position":16,"is_corresponding":false},{"id":247950,"name":"Richard L. Burger","orcid":"0000-0002-0664-0645","position":17,"is_corresponding":false},{"id":51156,"name":"Lauren Cadwallader","orcid":"0000-0002-7571-3502","position":18,"is_corresponding":false},{"id":247951,"name":"Ricardo Fujita","orcid":"0000-0002-9617-5109","position":19,"is_corresponding":false},{"id":247952,"name":"Johny Isla","orcid":"0000-0001-6164-8124","position":20,"is_corresponding":false},{"id":247953,"name":"George Lau","orcid":"0000-0002-0089-3625","position":21,"is_corresponding":false},{"id":248933,"name":"Carlos Lémuz Aguirre","orcid":null,"position":22,"is_corresponding":false},{"id":247954,"name":"Steven A. LeBlanc","orcid":"0000-0001-9201-1070","position":23,"is_corresponding":false},{"id":247955,"name":"Sergio Calla Maldonado","orcid":"0000-0001-6314-5125","position":24,"is_corresponding":false},{"id":247956,"name":"Frank Meddens","orcid":"0000-0002-7210-7101","position":25,"is_corresponding":false},{"id":248934,"name":"Pablo G. Messineo","orcid":null,"position":26,"is_corresponding":false},{"id":247957,"name":"Brendan J. Culleton","orcid":"0000-0003-1200-9531","position":27,"is_corresponding":false},{"id":247958,"name":"Thomas K. Harper","orcid":"0000-0002-4969-1653","position":28,"is_corresponding":false},{"id":248935,"name":"Jeffrey Quilter","orcid":null,"position":29,"is_corresponding":false},{"id":248936,"name":"Gustavo Politis","orcid":null,"position":30,"is_corresponding":false},{"id":247959,"name":"Kurt Rademaker","orcid":"0000-0001-5676-4884","position":31,"is_corresponding":false},{"id":247960,"name":"Markus Reindel","orcid":"0000-0003-1223-304X","position":32,"is_corresponding":false},{"id":247961,"name":"Mario A. Rivera","orcid":"0000-0003-3134-8176","position":33,"is_corresponding":false},{"id":247962,"name":"Lucy C. Salazar","orcid":"0000-0001-5616-7369","position":34,"is_corresponding":false},{"id":247963,"name":"José R. Sandoval","orcid":"0000-0003-2673-4937","position":35,"is_corresponding":false},{"id":247964,"name":"Calógero M. Santoro","orcid":"0000-0002-3702-8408","position":36,"is_corresponding":false},{"id":248937,"name":"Nahuel A. Scheifler","orcid":null,"position":37,"is_corresponding":false},{"id":247965,"name":"Vivien G. Standen","orcid":"0000-0002-7510-5160","position":38,"is_corresponding":false},{"id":247966,"name":"Maria Inês Barreto","orcid":"0000-0002-1856-5355","position":39,"is_corresponding":false},{"id":248938,"name":"Isabel Flores Espinoza","orcid":null,"position":40,"is_corresponding":false},{"id":247967,"name":"Elsa Tomasto-Cagigao","orcid":"0000-0002-5326-8102","position":41,"is_corresponding":false},{"id":247968,"name":"Guido Valverde","orcid":"0000-0001-6201-6030","position":42,"is_corresponding":false},{"id":247969,"name":"Douglas J. Kennett","orcid":"0000-0001-6144-7365","position":43,"is_corresponding":false},{"id":247970,"name":"Alan Cooper","orcid":"0000-0002-7738-7851","position":44,"is_corresponding":false},{"id":7650,"name":"Johannes Krause","orcid":"0000-0001-9144-3920","position":45,"is_corresponding":false},{"id":247971,"name":"Wolfgang Haak","orcid":"0000-0003-2475-2007","position":46,"is_corresponding":false},{"id":247972,"name":"Bastien Llamas","orcid":"0000-0002-5550-9176","position":47,"is_corresponding":false},{"id":724,"name":"David Reich","orcid":"0000-0002-7037-5292","position":48,"is_corresponding":false},{"id":247973,"name":"Lars Fehren‐Schmitz","orcid":"0000-0001-5510-1114","position":49,"is_corresponding":false},{"id":247940,"name":"Nathan Nakatsuka","orcid":"0000-0002-5091-4914","position":0,"is_corresponding":true}],"reference_count":149,"raw_metadata":null,"created_at":"2026-07-18T20:38:25.860949Z","pmid":"32386546","pmcid":"PMC7304944","fwci":null,"citation_percentile":null,"influential_citations":0,"oa_status":null,"license":null,"views":0,"total_file_size_bytes":0,"version_count":0,"fair_f":94.4444,"fair_a":62.5,"fair_i":0.0,"fair_r":33.3333,"fair_zscore":0.9454,"fair_rationale":{"fair_score":58.33,"has_llm":true,"taxonomy_version":"fair_taxonomy_v5","dimensions":{"F":{"name":"Findable","score":94.44,"criteria":[{"key":"f_dataset_pid","label":"Persistent identifier for the data","kind":"llm","weight":2.0,"fraction":1.0,"verdict":"yes","evidence":"All sequencing data are available from the European Nucleotide Archive, accession number: PRJEB37446.","grounded":true,"rationale":"The paper provides a persistent identifier in the form of an ENA accession (PRJEB37446).","anchors":["RDA-F1-01D — FAIR Data Maturity Model: 'Data is identified by a persistent identifier' (priorit","RDA-F1-02D — FAIR Data Maturity Model: 'Data is identified by a globally unique identifier'","FsF-F1-02D — F-UJI/FAIRsFAIR: 'Data is assigned a persistent identifier'"],"scored":true,"signal":null},{"key":"f_repository_named","label":"Named repository","kind":"llm","weight":2.0,"fraction":1.0,"verdict":"yes","evidence":"All sequencing data are available from the European Nucleotide Archive","grounded":true,"rationale":"The European Nucleotide Archive is a named data repository.","anchors":["RDA-F4-01M — FAIR Data Maturity Model: metadata is offered so it can be harvested and indexed (","NIH DMS Policy Element 4 (NOT-OD-21-014) — name the repository where data will be archived","NSTC Desirable Characteristics of Data Repositories (2022) — 'Long-Term Sustainability', 'Reten"],"scored":true,"signal":null},{"key":"f_data_availability_statement","label":"Data-availability statement","kind":"llm","weight":2.0,"fraction":1.0,"verdict":"yes","evidence":"Data and Code Availability All sequencing data are available from the European Nucleotide Archive, accession number: PRJEB37446.","grounded":true,"rationale":"The data availability statement points to a repository record with an accession number.","anchors":["Colavizza, Hrynaszkiewicz, Staden, Whitaker & McGillivray (2020), 'The citation advantage of li","Springer Nature research data policy — Data Availability Statements: standard statement templat","RDA-F3-01M — metadata clearly and explicitly includes the identifier of the data it describes"],"scored":false,"signal":null},{"key":"f_discovery_metadata","label":"Description of the dataset as an object","kind":"llm","weight":2.0,"fraction":1.0,"verdict":"yes","evidence":"Table S1 Details of All Individuals in This Study, Related to Figure 1","grounded":true,"rationale":"The paper includes a supplementary table (Table S1) that itemises the individuals in the dataset, serving as an inventory. 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'Free to use' is not a licence: it grants nothing a reuser's institution can rely on.","anchors":["yes","partial","no"],"verdict":"no","current":0.0,"evidence":null,"why":"No license is specified for the data; the CC BY license applies only to the article.","gain":16.67,"priority":"essential","scored":true},{"key":"i_open_nonproprietary_format","dimension":"I","label":"Open file format","action":"Release the data in an open, community-standard format (CSV/TSV, JSON, HDF5, NetCDF, FASTQ, VCF, NIfTI…) instead of — or alongside — any proprietary or instrument-native format, and name the format in the paper. A dataset that needs a €2,000 licence to open is not reusable. 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Prefer open neuroimaging formats such as NIfTI or BIDS.","Publish the analysis code in a public forge, archive a tagged release with a DOI (Zenodo/Software Heritage), and cite that DOI in the paper. NIH DMS Element 2 asks for the tools and code, not only the data — and 'available on request' is not a locator. Archive the analysis code in a versioned repository (GitHub + a Zenodo release DOI).","Cite the dataset in the reference list like a publication — creator, year, title, repository, DOI/accession — and cite it in-text where it is used. Only a reference- list entry is machine-readable to Crossref/DataCite, and only a citation lets the data earn credit. Cite the neuroimaging repository accession (e.g. from OpenNeuro or NeuroVault) in the reference list.","Version the deposit and cite the exact version analysed (a version-specific DOI, or an accession with its version suffix). A reader reproducing your work against 'the current release' is reproducing it against a different dataset."],"model":"deepseek/deepseek-v4-flash","agent_version":"fair_agent_v8","fulltext_source":"epmc_xml"},"fair_model":"deepseek/deepseek-v4-flash","fair_agent_version":"fair_agent_v8","fair_fulltext_source":"epmc_xml","fair_has_llm":true,"fair_computed_at":"2026-07-20T10:54:44.996391Z","clinical_trials":[],"software_tools":[],"db_accessions":[],"linked_datasets":[],"topics":[]}