{"doi":"10.1007/s10592-009-9949-2","title":"Detecting bottlenecks using BOTTLENECK 1.2.02 in wild populations: the importance of the microsatellite structure","abstract":null,"journal":"Conservation Genetics","year":2010,"id":596934,"datarank":0.7454719949364003,"base_score":4.969813299576001,"endowment":4.969813299576001,"self_citation_contribution":0.7454719949364003,"citation_network_contribution":0.0,"self_endowment_contribution":0.7454719949364003,"citer_contribution":0.0,"corpus_percentile":null,"corpus_rank":null,"citation_count":143,"citer_count":0,"citers_with_citation_signal":0,"citers_with_endowment":0,"datacite_reuse_total":25,"is_dataset":false,"is_dataset_confidence":null,"is_data_producer":false,"deposit_databanks":null,"is_oa":false,"file_count":0,"downloads":0,"has_version_chain":false,"published_date":null,"fair_score":null,"fair_percentile":null,"algorithm_id":"datarank_citation_only_1hop_v6","ranking_scope":"data_only","authors":[{"id":1528987,"name":"William Bruce Sherwin","orcid":null,"position":1,"is_corresponding":false},{"id":1528988,"name":"Kathrine Handasyde","orcid":null,"position":2,"is_corresponding":false},{"id":1528989,"name":"Valma Cahill","orcid":null,"position":3,"is_corresponding":false},{"id":1528990,"name":"Desmond W. Cooper","orcid":null,"position":4,"is_corresponding":false},{"id":1528986,"name":"Romane Cristescu","orcid":null,"position":0,"is_corresponding":false}],"reference_count":0,"raw_metadata":{"has_enrichment":true,"resolved":true,"title":"Detecting bottlenecks using BOTTLENECK 1.2.02 in wild populations: the importance of the microsatellite structure","abstract":"Reduced, or bottlenecked, populations are more prone to adverse events. Thus, the detection of genetic bottleneck signatures in wildlife is an important issue for conservation. BOTTLENECK 1.2.02 is a software commonly used for detecting genetic characteristics of past bottlenecks. Here we test the efficiency with which this software detects bottlenecks in two koala populations of known history. The sign test performed well for both populations, particularly under the infinite alleles model for mutation. This suggests this model could be the more realistic for marsupial microsatellites than other mutation models. Under the allele frequency distribution test, the two populations falsely appeared to be at mutation/drift equilibrium. However, this test could detect the bottleneck when only imperfect repeat microsatellites were included in the analysis. We thus recommend further investigation of imperfect repeat microsatellites, which could be more powerful for bottleneck detection. These results underline the cautious approach researchers and conservationists should take when studying the past of unknown populations.","is_dataset_classified":null,"base_score":4.969813299576001,"endowment":4.969813299576001,"datacite_reuse_total":25,"file_count":0,"downloads":0,"views":0,"has_version_chain":false,"is_dataset":false,"is_oa":false,"pmid":"21097893","pmcid":null,"openalex_id":"https://openalex.org/W2055318437","authors":[],"funders":[],"total_grants":0,"fwci":3.2179,"citation_percentile":0.92341109,"influential_citations":17,"citation_trend":[{"year":2012,"count":9},{"year":2013,"count":5},{"year":2014,"count":7},{"year":2015,"count":6},{"year":2016,"count":7},{"year":2017,"count":7},{"year":2018,"count":6},{"year":2019,"count":5},{"year":2020,"count":6},{"year":2021,"count":32},{"year":2022,"count":3},{"year":2023,"count":22},{"year":2024,"count":6},{"year":2025,"count":8},{"year":2026,"count":5}],"oa_status":"closed","license":"http://www.springer.com/tdm","oa_locations":[{"url":"http://link.springer.com/content/pdf/10.1007/s10592-009-9949-2.pdf","host_type":"publisher"},{"url":"http://link.springer.com/article/10.1007/s10592-009-9949-2/fulltext.html","host_type":"publisher"},{"url":"http://link.springer.com/content/pdf/10.1007/s10592-009-9949-2","host_type":"publisher"},{"url":"https://doi.org/10.1007/s10592-009-9949-2","host_type":"journal"},{"url":"http://dx.doi.org/10.1007/s10592-009-9949-2","host_type":"repository"}],"fields_of_study":["Genetic diversity and population structure","Genetic and phenotypic traits in livestock","Genetic Mapping and Diversity in Plants and Animals","Biology","Environmental Science"],"mesh_terms":[],"keywords":["Bottleneck","Population bottleneck","Biology","Microsatellite","Mutation","Evolutionary biology","Allele","Genetics","Computer science","Gene"],"sdg_mappings":[],"linked_datasets":[{"doi":"10.6084/m9.figshare.13532596.v1","title":"Additional file 1 of Dispersal patterns and population genetic structure of Aedes albopictus (Diptera: Culicidae) in three different climatic regions of China","publisher":"figshare","resource_type":"JournalArticle"},{"doi":"10.6084/m9.figshare.13532596","title":"Additional file 1 of Dispersal patterns and population genetic structure of Aedes albopictus (Diptera: Culicidae) in three different climatic regions of China","publisher":"figshare","resource_type":"JournalArticle"},{"doi":"10.6084/m9.figshare.13532599.v1","title":"Additional file 2 of Dispersal patterns and population genetic structure of Aedes albopictus (Diptera: Culicidae) in three different climatic regions of China","publisher":"figshare","resource_type":"JournalArticle"},{"doi":"10.6084/m9.figshare.13532599","title":"Additional file 2 of Dispersal patterns and population genetic structure of Aedes albopictus (Diptera: Culicidae) in three different climatic regions of China","publisher":"figshare","resource_type":"JournalArticle"},{"doi":"10.6084/m9.figshare.13532602.v1","title":"Additional file 3 of Dispersal patterns and population genetic structure of Aedes albopictus (Diptera: Culicidae) in three different climatic regions of China","publisher":"figshare","resource_type":"JournalArticle"},{"doi":"10.6084/m9.figshare.13532602","title":"Additional file 3 of Dispersal patterns and population genetic structure of Aedes albopictus (Diptera: Culicidae) in three different climatic regions of China","publisher":"figshare","resource_type":"JournalArticle"},{"doi":"10.6084/m9.figshare.13532605.v1","title":"Additional file 4 of Dispersal patterns and population genetic structure of Aedes albopictus (Diptera: Culicidae) in three different climatic regions of China","publisher":"figshare","resource_type":"JournalArticle"},{"doi":"10.6084/m9.figshare.13532605","title":"Additional file 4 of Dispersal patterns and population genetic structure of Aedes albopictus (Diptera: Culicidae) in three different climatic regions of China","publisher":"figshare","resource_type":"JournalArticle"},{"doi":"10.6084/m9.figshare.13532623.v1","title":"Additional file 8 of Dispersal patterns and population genetic structure of Aedes albopictus (Diptera: Culicidae) in three different climatic regions of China","publisher":"figshare","resource_type":"JournalArticle"},{"doi":"10.6084/m9.figshare.13532623","title":"Additional file 8 of Dispersal patterns and population genetic structure of Aedes albopictus (Diptera: Culicidae) in three different climatic regions of China","publisher":"figshare","resource_type":"JournalArticle"},{"doi":"10.6084/m9.figshare.24112996.v1","title":"Additional file 1 of Genetic diversity of Aedes aegypti and Aedes albopictus from cohabiting fields in Hainan Island and the Leizhou Peninsula, China","publisher":"figshare","resource_type":"JournalArticle"},{"doi":"10.6084/m9.figshare.24112996","title":"Additional file 1 of Genetic diversity of Aedes aegypti and Aedes albopictus from cohabiting fields in Hainan Island and the Leizhou Peninsula, China","publisher":"figshare","resource_type":"JournalArticle"},{"doi":"10.6084/m9.figshare.24112999.v1","title":"Additional file 2 of Genetic diversity of Aedes aegypti and Aedes albopictus from cohabiting fields in Hainan Island and the Leizhou Peninsula, China","publisher":"figshare","resource_type":"JournalArticle"},{"doi":"10.6084/m9.figshare.24112999","title":"Additional file 2 of Genetic diversity of Aedes aegypti and Aedes albopictus from cohabiting fields in Hainan Island and the Leizhou Peninsula, China","publisher":"figshare","resource_type":"JournalArticle"},{"doi":"10.6084/m9.figshare.24113002.v1","title":"Additional file 3 of Genetic diversity of Aedes aegypti and Aedes albopictus from cohabiting fields in Hainan Island and the Leizhou Peninsula, China","publisher":"figshare","resource_type":"JournalArticle"},{"doi":"10.6084/m9.figshare.24113002","title":"Additional file 3 of Genetic diversity of Aedes aegypti and Aedes albopictus from cohabiting fields in Hainan Island and the Leizhou Peninsula, China","publisher":"figshare","resource_type":"JournalArticle"},{"doi":"10.6084/m9.figshare.24113005","title":"Additional file 4 of Genetic diversity of Aedes aegypti and Aedes albopictus from cohabiting fields in Hainan Island and the Leizhou Peninsula, China","publisher":"figshare","resource_type":"JournalArticle"},{"doi":"10.6084/m9.figshare.24113005.v1","title":"Additional file 4 of Genetic diversity of Aedes aegypti and Aedes albopictus from cohabiting fields in Hainan Island and the Leizhou Peninsula, China","publisher":"figshare","resource_type":"JournalArticle"},{"doi":"10.6084/m9.figshare.24113011.v1","title":"Additional file 5 of Genetic diversity of Aedes aegypti and Aedes albopictus from cohabiting fields in Hainan Island and the Leizhou Peninsula, China","publisher":"figshare","resource_type":"JournalArticle"},{"doi":"10.6084/m9.figshare.24113011","title":"Additional file 5 of Genetic diversity of Aedes aegypti and Aedes albopictus from cohabiting fields in Hainan Island and the Leizhou Peninsula, China","publisher":"figshare","resource_type":"JournalArticle"},{"doi":"10.6084/m9.figshare.24113014.v1","title":"Additional file 6 of Genetic diversity of Aedes aegypti and Aedes albopictus from cohabiting fields in Hainan Island and the Leizhou Peninsula, China","publisher":"figshare","resource_type":"JournalArticle"},{"doi":"10.6084/m9.figshare.24113014","title":"Additional file 6 of Genetic diversity of Aedes aegypti and Aedes albopictus from cohabiting fields in Hainan Island and the Leizhou Peninsula, China","publisher":"figshare","resource_type":"JournalArticle"},{"doi":"10.6084/m9.figshare.13532629.v1","title":"Additional file 9 of Dispersal patterns and population genetic structure of Aedes albopictus (Diptera: Culicidae) in three different climatic regions of China","publisher":"figshare","resource_type":"Image"},{"doi":"10.6084/m9.figshare.13532629","title":"Additional file 9 of Dispersal patterns and population genetic structure of Aedes albopictus (Diptera: Culicidae) in three different climatic regions of China","publisher":"figshare","resource_type":"Image"},{"doi":"10.6084/m9.figshare.13532620.v1","title":"Additional file 7 of Dispersal patterns and population genetic structure of Aedes albopictus (Diptera: Culicidae) in three different climatic regions of China","publisher":"figshare","resource_type":"Image"}],"clinical_trials":[],"software_tools":[],"database_accessions":[],"source":"live","citation_network_status":"fetched"},"created_at":"2026-07-28T11:46:15.934855Z","pmid":null,"pmcid":null,"fwci":null,"citation_percentile":null,"influential_citations":0,"oa_status":null,"license":null,"views":0,"total_file_size_bytes":0,"version_count":0,"fair_f":null,"fair_a":null,"fair_i":null,"fair_r":null,"fair_zscore":null,"fair_rationale":null,"fair_model":null,"fair_agent_version":null,"fair_fulltext_source":null,"fair_has_llm":null,"fair_computed_at":null,"clinical_trials":[],"software_tools":[],"db_accessions":[],"linked_datasets":[],"topics":[]}