{"doi":"10.1002/prot.70035","title":"Highlights of Model Quality Assessment in <scp>CASP16</scp>","abstract":"Model quality assessment (MQA) remains a critical component of structural bioinformatics for both structure predictors and experimentalists seeking to use predictions for downstream applications. In CASP16, the Evaluation of Model Accuracy (EMA) category featured both global and local quality estimation for multimeric assemblies (QMODE1 and QMODE2), as well as a novel QMODE3 challenge-requiring predictors to identify the best five models from thousands generated by MassiveFold. This paper presents detailed results from several leading CASP16 EMA methods, highlighting the strengths and limitations of the approaches.","journal":"Proteins Structure Function and Bioinformatics","year":2025,"id":546033,"datarank":0.0,"base_score":0.0,"endowment":0.0,"self_citation_contribution":0.0,"citation_network_contribution":0.0,"self_endowment_contribution":0.0,"citer_contribution":0.0,"corpus_percentile":null,"corpus_rank":null,"citation_count":1,"citer_count":0,"citers_with_citation_signal":0,"citers_with_endowment":0,"datacite_reuse_total":0,"is_dataset":false,"is_dataset_confidence":0.9558,"is_data_producer":false,"deposit_databanks":null,"is_oa":true,"file_count":0,"downloads":0,"has_version_chain":false,"published_date":"2025-01-01","fair_score":null,"fair_percentile":null,"algorithm_id":"datarank_citation_only_1hop_v6","ranking_scope":"data_only","authors":[{"id":1437273,"name":"Recep Adiyaman","orcid":"0000-0001-8124-5381","position":1,"is_corresponding":false},{"id":1437782,"name":"Shaima N Alhaddad","orcid":null,"position":2,"is_corresponding":false},{"id":1437783,"name":"Bijan Behzadi","orcid":null,"position":3,"is_corresponding":false},{"id":236517,"name":"Jianlin Cheng","orcid":"0000-0003-0305-2853","position":4,"is_corresponding":false},{"id":1437274,"name":"Xinyue Cui","orcid":"0009-0005-6015-2449","position":5,"is_corresponding":false},{"id":1437784,"name":"Nicholas S. Edmunds","orcid":null,"position":6,"is_corresponding":false},{"id":506370,"name":"Lydia Freddolino","orcid":"0000-0002-5821-4226","position":7,"is_corresponding":false},{"id":1437275,"name":"Ahmet G Genc","orcid":"0009-0001-7195-9353","position":8,"is_corresponding":false},{"id":1437276,"name":"Fang Liang","orcid":"0009-0006-4834-5755","position":9,"is_corresponding":false},{"id":259480,"name":"Dong Liu","orcid":"0000-0002-2764-6544","position":10,"is_corresponding":false},{"id":1058537,"name":"Jian Liu","orcid":"0000-0002-7570-8690","position":11,"is_corresponding":false},{"id":1437277,"name":"Quancheng Liu","orcid":"0009-0004-8207-2629","position":12,"is_corresponding":false},{"id":1437278,"name":"Liam J. McGuffin","orcid":"0000-0003-4501-4767","position":13,"is_corresponding":false},{"id":1290815,"name":"Pawan Neupane","orcid":"0009-0008-5283-4951","position":14,"is_corresponding":false},{"id":893969,"name":"Chunxiang Peng","orcid":"0009-0006-9735-0278","position":15,"is_corresponding":false},{"id":1437785,"name":"David Shortle","orcid":null,"position":16,"is_corresponding":false},{"id":1437786,"name":"Sun Meng","orcid":null,"position":17,"is_corresponding":false},{"id":1437279,"name":"Haodong Wang","orcid":"0009-0000-1896-9408","position":18,"is_corresponding":false},{"id":512433,"name":"Qiqige Wuyun","orcid":"0000-0002-7228-903X","position":19,"is_corresponding":false},{"id":839299,"name":"Guijun Zhang","orcid":"0000-0002-7815-5884","position":20,"is_corresponding":false},{"id":1437280,"name":"Xuanfeng Zhao","orcid":"0009-0005-0455-9500","position":21,"is_corresponding":false},{"id":529892,"name":"Wei Zheng","orcid":"0000-0002-2984-9003","position":22,"is_corresponding":false},{"id":6667,"name":"Randy J. Read","orcid":"0000-0001-8273-0047","position":23,"is_corresponding":false},{"id":1045087,"name":"Alisia Fadini","orcid":"0000-0001-5246-9124","position":0,"is_corresponding":true}],"reference_count":56,"raw_metadata":null,"created_at":"2026-07-19T02:53:27.751050Z","pmid":"40810260","pmcid":null,"fwci":null,"citation_percentile":null,"influential_citations":0,"oa_status":null,"license":null,"views":0,"total_file_size_bytes":0,"version_count":0,"fair_f":null,"fair_a":null,"fair_i":null,"fair_r":null,"fair_zscore":null,"fair_rationale":null,"fair_model":null,"fair_agent_version":null,"fair_fulltext_source":null,"fair_has_llm":null,"fair_computed_at":null,"clinical_trials":[],"software_tools":[],"db_accessions":[],"linked_datasets":[],"topics":[]}